Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0014 |
Symbol | traG |
ID | 6106512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 14829 |
End bp | 17651 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641614761 |
Product | conjugal transfer mating pair stabilization protein TraG |
Protein accession | YP_001739902 |
Protein GI | 170650902 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATGAAG TTTATGTGAT TGCCGGTGGT GAGTGGTTGC GGAATAACCT GAACGCCATT GCCGCCTTTA TGGGAACCAG GACGTGGGAT TCCATTGAAA AAATTGCGCT CACATTGTCT GTTCTCGCGG TGGCCGTGAT GTGGGTACAG CGGCACAACG TGATGGATTT GCTGGGCTGG GTGGCCGTGT TTGTGCTTAT CAGCCTGTTG GTTAATGTCC GCACATCGGT GCAGATTATT GATAACAGTG ACCTGGTCAA AGTTCACCGG GTGGATAATG TACCGGTCGG ACTGGCGATG CCACTTTCAC TGACGACCCG TATCGGGCAT GCAATGGTGG CCAGTTACGA GATGATCTTC ACGCAACCGG ACAGTGTCAC CTACAGCAAA ACGGGGATGC TGTTTGGCGC AGAACTGGTA TCAAAAAGCA CCGACTTTTT GTCCCGCAAT CCGGAAATCG CCAATCTTTT CCAGGATTAT GTGCAGAACT GCGTGATGGG GGATATTTAC CTGAACCACA AATACACGCT GGAGGAGCTG ATGGCCTCCG CTGATCCCTA CACGCTGATT TTTTCCCGCC CCAGTCCGCT ACGGGGCGTT TATGACAGCA ATAATAATTT CGTGACCTGT AAGGACGCGT CGGTTTCGCT GAAAGACAAG CTGAATCTGG ATACACAGAG TGGCGGAAAA ACCTGGCATT ATTATGCCCA GCAGCTATTT GGTGGACGCC CTGATCCGAA CCTGTTGTTC AGTACGCTGA TTGGCGACAG TTACAGTTAC TTCTATGGCT CAAGTAAATC AGCCAGCCAG ATCATCCGCC AGAATGTCAC CATCAATGCG CTGAAGGAGG GGATCACCAG TTATGCCGCG CGTAATGGTG ATTCAGCCAG CCTGGTGAAT CTGGCCACCA CGTCATCGAT GGAGAAGCAA CGTCTGGCAC ATGTCTCCAT CGGTCATGTG GCGATGCGGA CACTGCCCAT GACGCAGACC ATCCTGACGG GGATCGCCAT CGGTATTTTC CCGCTTCTGG TACTGGCGGC TGTCTTCAAC AAACTGACGC TGTCCGTCCT GAAAGGCTAT GTGTTTGCCC TGATGTGGTT GCAGTCATGG CCAATGTTGT ACGCCATTCT GAACAGCGCC ATGACATTTT ATGCGAAGCA GAATGGTGCA CCGGTGGTGC TCTCGGAAAT TTCACAGATA CAGCTGAAAT ACTCCGATCT GGCTTCCACT GCCGGGTATC TTTCCATGAT GATCCCGCCA TTATCCTGGA TGATGGTCAG GGGACTCGGG GCCGGATTTT CCAGTGTGTA CAGCCATTTC GCTTCCTCTG CTATCAGCCC GACTGCCAGT GCGGCAGGTA GTGTGGTTGA CGGTAATTAC TCCTACGGCA ACATGCAGAC GGAAAACGTG AACGGATTCA GCTGGAGCAC CAACAGCACC ACGTCGTTTG GTCAGATGAT GTACCAGACC GGCAGTGGCG CAACCGCCAC ACAGACCCGT GACGGTAATA TGGTGATGGA TGCGAGCGGG GCGATGTCCC GTTTACCGGT CGGTATCAAT GCAACGCGTC AGATTGCGGC GGCACAACAG GAAATGGCCC GGGAGGCGTC GAACAGAGCA GAAAGCGCCC TGCATGGGTT CAGCAGCAGT ATTGCCAGTG CCTGGAACTC GCTCAGTCAG TTTGGTTCTA ACCGGGGGAG CAGTGATTCT GTCACCGGTG GTGCTGACAG CACGATGAGC GCACAGGACT CCATGATGGC CAGCCGTATG CGCAGCGCAG TGGAAAGCTA TGCGAAGGCG CATAATATCA GTAATGAGCA GGCGACAAGA GAACTGGCAT CAAGAAGTAC GAGAGGTTCT GCGGGGATGT ATGGCGATGC TCATGCTGAA TGGGGGGTTA AACCTAAAAT TCTTGGTGTT GGTGGTGGCG TAGGTGTTAG AGGTGGTGGT CGGGCAAGTA TTGACTGGAG TGATGAGGAT GCGCATCAGG CCAGCAGTGG TTCACGGGCC AGCCATGATG CTCGCCATGA TATCGATGCC AGGGCTACAC AAGACTTTAA AGAGGCCAGC GATTACTTTA CCAGTCGCAA GGTCAGTGAA TCCGGCAGCC ATACGGACAA TAATGCCGAT TCCCGTGTGG ACCAGCTGTC TGCAGCCCTG AACTCAGCAA AACAGAGTTA CGACCAGTAC ACGACGAATA TGACCCGCAG CCATGAATAT GCTGAAATGG CATCCCGTAC TGAAAGCATG AGTGGGCAGA TGAGTGAAGA CCTGTCGCAA CAGTTTGCAC AGTATGTGAT GAAACACGCG CCGCAGGATG CCGAAGCTAT TCTGACAAAC ACCAGTTCCC CGGAGATTGC AGAACGCCGT CGGGCTATGG CGTGGTCTTT TGTTCAGGAA CAGGTGCAGC CTGGTGTTGA TAATGCCTGG CGTGAATCCC GTGGGGACAT CGGTAAAGGA ATGGAGAGCG TACCTTCGGG GGGGGGCAGC CAGGATATTA TTGCTGATCA TCAGGGGCAT CAGGCCATTA TTGAGCAAAG AACGCAGGAC AGTAATATCC GTAATGATGT AAAACATCAG GTTGATAATA TGGTCACAGA ATACCGAGGC AATATCGGAG ATACTCAGAG CAGCATACGT GGCGAAGAAA ATATTGTAGG AAGACAGTAT TCTGAACTAC AAAATCACCA TAAAACAGAG GCATTATCTC AGAATAATAA ATATAATGAA GAAAAATCGG GTCAGGAAAG AATGCCCGGG GCTGACAGTC CACAGGAACT GATGAAAAGA GCAAAGGAGT ATCAGGATAA GCACAAGCAA TAA
|
Protein sequence | MNEVYVIAGG EWLRNNLNAI AAFMGTRTWD SIEKIALTLS VLAVAVMWVQ RHNVMDLLGW VAVFVLISLL VNVRTSVQII DNSDLVKVHR VDNVPVGLAM PLSLTTRIGH AMVASYEMIF TQPDSVTYSK TGMLFGAELV SKSTDFLSRN PEIANLFQDY VQNCVMGDIY LNHKYTLEEL MASADPYTLI FSRPSPLRGV YDSNNNFVTC KDASVSLKDK LNLDTQSGGK TWHYYAQQLF GGRPDPNLLF STLIGDSYSY FYGSSKSASQ IIRQNVTINA LKEGITSYAA RNGDSASLVN LATTSSMEKQ RLAHVSIGHV AMRTLPMTQT ILTGIAIGIF PLLVLAAVFN KLTLSVLKGY VFALMWLQSW PMLYAILNSA MTFYAKQNGA PVVLSEISQI QLKYSDLAST AGYLSMMIPP LSWMMVRGLG AGFSSVYSHF ASSAISPTAS AAGSVVDGNY SYGNMQTENV NGFSWSTNST TSFGQMMYQT GSGATATQTR DGNMVMDASG AMSRLPVGIN ATRQIAAAQQ EMAREASNRA ESALHGFSSS IASAWNSLSQ FGSNRGSSDS VTGGADSTMS AQDSMMASRM RSAVESYAKA HNISNEQATR ELASRSTRGS AGMYGDAHAE WGVKPKILGV GGGVGVRGGG RASIDWSDED AHQASSGSRA SHDARHDIDA RATQDFKEAS DYFTSRKVSE SGSHTDNNAD SRVDQLSAAL NSAKQSYDQY TTNMTRSHEY AEMASRTESM SGQMSEDLSQ QFAQYVMKHA PQDAEAILTN TSSPEIAERR RAMAWSFVQE QVQPGVDNAW RESRGDIGKG MESVPSGGGS QDIIADHQGH QAIIEQRTQD SNIRNDVKHQ VDNMVTEYRG NIGDTQSSIR GEENIVGRQY SELQNHHKTE ALSQNNKYNE EKSGQERMPG ADSPQELMKR AKEYQDKHKQ
|
| |