| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0009 |
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| Symbol | traX |
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| ID | 6106490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 5088 |
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| End bp | 5834 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641614756 |
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| Product | conjugal transfer pilus acetylation protein TraX |
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| Protein accession | YP_001739897 |
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| Protein GI | 170650820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02755] type-F conjugative transfer system pilin acetylase TraX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000759662 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAACGG ATAACACGAA CACGACACGT AACGATTCAC TGGTTGCCCG GACCGATACC
TGGTTGCAGT CGTTGCTGGT CTGGTCACCC GGACAGCGGG ATATCATCAA AACGGTGGCA
CTGGTGCTGA TGGTTCTGGA CCATGCAAAC CGTATTCTGC ATCTGGACCA GTCGTGGATG
TTTCTGGCCG GGCGCGGGGC CTTTCCGCTG TTTGCCCTGG TGTGGGGGCT GAATCTGTCC
CGTCATGCGC ATATCCGGCA ACTGGCCATT AACCGGCTGT GGGGATGGGC AGTTTTTTCC
CAGTTCTGGT ATTACTTTGC CGGCTTTCCC TGGTATGAGG GGAATATCCT GTTTGCCTTT
GCAGTGGCGG CACAGGTGCT GACATGGTGT GAAACGCGCA GTGGGTGGCG TACTGCAGCG
GCCATTCTCA TGATGGCACT GTGGGGGCCT TTGTCCGGCA CCAGTTACGG CATTGCCGGG
CTGCTGATGC TGGCTGTCAG CCACCGGCTG TACCGTGCGG AAGACAGAAT GGAACGTCTG
GTGCTTGTCG CTTGCCTGCT GGCCGTGATT CCGGCGCTTA ACCTTGCCAC CAGTGATGCC
GCGGCGGTGG CCGGCCTTGT GATGACGGTG CTGACCGTTG GTCTGGTGTC CTGTGCAGGG
AAATCATTAC CCCGTTTCTG GCCCGGAGAT TTTTTCCCGA CGTTCTATGC CTGTCATCTG
GCTGTGCTGG GCGTTCTGGC GCTGTAA
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| Protein sequence | MTTDNTNTTR NDSLVARTDT WLQSLLVWSP GQRDIIKTVA LVLMVLDHAN RILHLDQSWM
FLAGRGAFPL FALVWGLNLS RHAHIRQLAI NRLWGWAVFS QFWYYFAGFP WYEGNILFAF
AVAAQVLTWC ETRSGWRTAA AILMMALWGP LSGTSYGIAG LLMLAVSHRL YRAEDRMERL
VLVACLLAVI PALNLATSDA AAVAGLVMTV LTVGLVSCAG KSLPRFWPGD FFPTFYACHL
AVLGVLAL
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