Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1840 |
Symbol | |
ID | 6093291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1866968 |
End bp | 1867882 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642489034 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001739851 |
Protein GI | 170289613 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAG ATGTGACGAG AGAAAACTTC TACAGAAGAC TGGACAAGTT TTTGAGAAAC ACGCTGAAAG ATTTTCCCCT TTCCACCATC TACAAACTCA TAAGGAAAGG GAAGGTGTAC GTCAACGGAA AACGGGTGAG GGATCCTGGA TTCGATCTGG AGGAAGGAGA CACCGTTGAG ATCAAATACG TGAATCTGGA AAACCTCCCC AAAAGATCCG ATAAAAAAGA TCTCACTCCA GTCCCCATGA AACTCGATAT AATTCACGAA AACGACAACT ACCTTGTCCT GAACAAACCG GCGGGAATTG CCATACATCC TGGAAAAGGT GTGCACGTAG CCACACTGAT AGAAGGACTG CTGTATTATG GGCAGGAGCA GGGATTTGAA CCTTTTCTTG TCCACAGGCT GGACAAAGAC ACTTCCGGCC TCCTGATTGT GGCAAAAAAC AGAGAAGCCG CAAGGGTTCT CACAGAGATG TTCAGGGGAA GAAACATGGA AAAAGAGTAC ATCGCACTCG TAAAGGGAGT ACCCGAAAAC AATCTGAAGA TCACTATTCC ACTGGACGGT CAGGAAGCGG TCTCTGAGAT CGTTTCGGTG AAACCCCTGA AGAACGTTTC CCTCCTCAGA GTGAAAATCC ACACCGGAAG AAAGCACCAG ATAAGAAGAC ACCTCTCACA GATAGGATTT CCCGTCGTGG GAGATGACAC CTACGGCGAC AGACAGTTCA ACAGAGAATT CAGAAGAAAG TACGCCCTGA AAAGGCATTT TCTTCACAGC TATCGCATGA GATTTTTTGA TCCCTGGGCT GAAGAGGAAA AAGACTTCAA GGCACCTCTC ACAGAAGACC TTCTGAACGT TTTGACGCTT CTGGAAGAGA GGAGTGATGA ATGGTTAGAG GAGTTTCTTT CCTGA
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Protein sequence | MRIDVTRENF YRRLDKFLRN TLKDFPLSTI YKLIRKGKVY VNGKRVRDPG FDLEEGDTVE IKYVNLENLP KRSDKKDLTP VPMKLDIIHE NDNYLVLNKP AGIAIHPGKG VHVATLIEGL LYYGQEQGFE PFLVHRLDKD TSGLLIVAKN REAARVLTEM FRGRNMEKEY IALVKGVPEN NLKITIPLDG QEAVSEIVSV KPLKNVSLLR VKIHTGRKHQ IRRHLSQIGF PVVGDDTYGD RQFNREFRRK YALKRHFLHS YRMRFFDPWA EEEKDFKAPL TEDLLNVLTL LEERSDEWLE EFLS
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