Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1828 |
Symbol | |
ID | 6093279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1853903 |
End bp | 1855420 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642489022 |
Product | DNA mismatch repair protein MutS domain-containing protein |
Protein accession | YP_001739839 |
Protein GI | 170289601 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.338904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTCTTC CCAGCGTTCT TTTTGTGGAC TCCGTGAGAA CCATTCAAGT TTCCCAAGAA ACCCTAAGAG ACTTGAGACT TGATCGTGTG GTTCGAGAGA TCGTTCAGGA ACGGAATGAT ATTTTAGAGT ATTACCTCTC ACCTGTTCAG GATGAGAAAA CCGTAAGGTA CCGCCAGGAA GTGATGAAAG ATTTGGAAAA CAACGAAAAA TTGCTGGAAG CCATCAGGAA GTTCGCAAAA GATATGGCAT CGTTTCATCG ACATATGAAA ATGGTAGAGC AACTGGAGTA CGAGTACAAC AGAAAAGGAT GGTTCCTGGA GACAGTCCTG ATATATTGCG ATGCGGTATC CGAACTGTCA CGCGCTATGA ACACTGCTAA ACTCCAATCC TCTGGACTGA GAAAATTTCG AGAGTACCTG AAAAGCTACG TTCGTTCTTC TTCCTTCGTT TCTCTTAAAG AAGAGGCTCA AAATGTGAAA CTGAAGCTCT CAAATGTAAA CTACTGTATC ATTATAAAAC CCGGCATGTT CACGGTGAAA CCCTACGAAG GAGAAAAAGA ATACTCCCCG GAGATAGAGA AGGTGTTCTC AAGATTCAAC CGCGAGAAAT GCGCGGACGA GTTTCAATTC GATATTGAAG AGGGGCTGGG GATGAGCCAT ATTGAAGCAA GGATTCTGGA GTTCGTATCG AGATTGTATC CAGAGCCCTT TATAACACTT GACCTTTTTT GCGAAAGAAA CGGGCGTTTT ACTGATAAAG TTATTCTGAA CTTTGAGAGG GAAATACAGT TTTATCTCTC GTACTTGGAT TTCATGGAAC CTCTGAGAAA AAAGGGATTA CCTTTCTGCT ATCCTGAGGT GTCTTCTGAT AAAAGCGAAT ACGTGGAAGA CGCTTTCGAC ATAGCACTAG CCAGTGGTTT GCTGGATACC AGGCAGCTTG TTTTCAATGA TTTTTATCTT GAAAACCCAG AGAGGGTGAT CGTCGTGACA GGACCGAACC AGGGTGGTAA AACAACCTTC GCAAGGATGA TTGGTCAACT TCATTATCTT GCCGCCCTGG GACTTCCCAT TCCCGCGAGA CGAGCGCGTT TGTTTTTACC CGACGCTATC TTCACTCATT TCGAAAGAGA GGAAAGGGTG CAGGATCAAA TGAGCAAACT AGAAAACGAC ATCCTCCGTG TAAAAGACAT CCTCGAAAGC ACTTCCTCCG AAAGTTTGAT CATATTGAAT GAGATTTTTT CTTCGGCTGC ACTGAGTGAT GCTCTGTTTT TGAGCAAAGA AATTATGAAA ACTATTTTGG AACGTGATTG CTTGTGTGTA TGGGTTACCT TCCTTGATGA ACTATCCAGA ATGAATGAGA AAATTGTGAG CATGGTCGCA ACTGTCTCCC CTCAGGATCC AGCTGTGAGA ACTTTCAAAA TCATCAGAAA ACCGGCTGAT GGACGATCGT ACGCTGTTTC GCTGGCGGAA AAGTATGGTC TCACATATTG GAAAATAAGG GAGCGTGTTG AACCATGA
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Protein sequence | MILPSVLFVD SVRTIQVSQE TLRDLRLDRV VREIVQERND ILEYYLSPVQ DEKTVRYRQE VMKDLENNEK LLEAIRKFAK DMASFHRHMK MVEQLEYEYN RKGWFLETVL IYCDAVSELS RAMNTAKLQS SGLRKFREYL KSYVRSSSFV SLKEEAQNVK LKLSNVNYCI IIKPGMFTVK PYEGEKEYSP EIEKVFSRFN REKCADEFQF DIEEGLGMSH IEARILEFVS RLYPEPFITL DLFCERNGRF TDKVILNFER EIQFYLSYLD FMEPLRKKGL PFCYPEVSSD KSEYVEDAFD IALASGLLDT RQLVFNDFYL ENPERVIVVT GPNQGGKTTF ARMIGQLHYL AALGLPIPAR RARLFLPDAI FTHFEREERV QDQMSKLEND ILRVKDILES TSSESLIILN EIFSSAALSD ALFLSKEIMK TILERDCLCV WVTFLDELSR MNEKIVSMVA TVSPQDPAVR TFKIIRKPAD GRSYAVSLAE KYGLTYWKIR ERVEP
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