Gene TRQ2_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1783 
Symbol 
ID6093234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand- 
Start bp1797108 
End bp1797638 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content43% 
IMG OID642488980 
Productintegral membrane protein-like protein 
Protein accessionYP_001739797 
Protein GI170289559 
COG category[S] Function unknown 
COG ID[COG5652] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000106195 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGT CTTTTCTGGT TCTAACCCTA ATACTGATGT GGATCGGTCT TGTTTTTTAC 
TTTTCATCGC AGCCTCCCGA TGTTTCTGGA AGGCAGTCCG GAAACGTCTA TAAATTCCTC 
AAAAAGGTAG ATAACGTTCT CGACTTCACC CAGACGAGAT GGTACAAAAA TTTGAGATCC 
CTACTCGAAA AATGGTGGTT CCCTGACAAG AAGCCAACGG GGGAAGATCT TGTCAGAAAA 
TCAGCCCATT TTGGACTTTA CTTTATAATG GGTATTCTTT CTTTCGTATT CAGTTATACT 
TATCTTAGAA AGTATGTGTT TTCTATTTTG ATGGGAACGT CTCTACCTAC ATTGATAGCC 
GTTCTCGATG AGTACAACCA GATTTTTCAC AACAGAGGAT CTTCACTGTA CGATGTGTTC 
ATAGACATGA ACGGTGCCCT GTTTGGAGTG GTGATTGCCC TTCTGACGCT GGTTGTTGTG 
AGGTTGATCA CCCGAGCGTA CAATGTCCGC CGGGGAGGGG GGATAGTATG A
 
Protein sequence
MKRSFLVLTL ILMWIGLVFY FSSQPPDVSG RQSGNVYKFL KKVDNVLDFT QTRWYKNLRS 
LLEKWWFPDK KPTGEDLVRK SAHFGLYFIM GILSFVFSYT YLRKYVFSIL MGTSLPTLIA 
VLDEYNQIFH NRGSSLYDVF IDMNGALFGV VIALLTLVVV RLITRAYNVR RGGGIV