Gene TRQ2_1778 details

Gene Information

• Locus tag: TRQ2_1778
• ID: 6093229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1793012
• End bp: 1793611
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 642488975
• Product: TetR family transcriptional regulator
• Protein accession: YP_001739792
• Protein GI: 170289554
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0789135
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGAAGA GGGATGCAAT ACTGAAGGCA GCGGTTGAGG TTTTCGGGAA AAAAGGTTAC 
GATCGAGCCA CAACAGACGA AATAGCAGAG AAAGCCGGGG TAGCCAAGGG TTTGATTTTT 
CACTATTTCA AGAACAAAGA AGAACTGTAC TATCAGGCAT ACATGTCCGT TACAGAAAAG 
CTCCAGAAGG AGTTCGAGAA TTTCCTTATG AAAAACAGGA ATAGAGACAT ATTTGACTTC 
ATGGAACGGT GGATAGAAAA GAAACTGGAG TACTCCGCTT CTCATCCCGA AGAAGCAGAT 
TTTCTGATAA CGCTCGTGAG CGTGGATGAA GGACTCAGGA AAAGAATACT TCTCGACCTC 
GAAAAATCAC AGAGGGTCTT TTTTGACTTC GTAAGGGAAA AATTGAAAGA TTTAGATCTC 
GCAGAAGATG TAACGGAGGA AATCGCTCTG AAATTTCTGA TGTGGTTCTT TTCCGGATTT 
GAAGAAGTCT ACCTGAGGAC CTATCAAGGT AAGCCCGAAC TGCTGAAAAG AGACATGAAC 
ACACTCGTTG AAGAAGTGAA GGTCATGCTC AGGATTTTGA AGAAAGGCAT GACAAAATAA 

 

Protein sequence

MSKRDAILKA AVEVFGKKGY DRATTDEIAE KAGVAKGLIF HYFKNKEELY YQAYMSVTEK 
LQKEFENFLM KNRNRDIFDF MERWIEKKLE YSASHPEEAD FLITLVSVDE GLRKRILLDL 
EKSQRVFFDF VREKLKDLDL AEDVTEEIAL KFLMWFFSGF EEVYLRTYQG KPELLKRDMN 
TLVEEVKVML RILKKGMTK