Gene TRQ2_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1771 
Symbol 
ID6093222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1787262 
End bp1787987 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content48% 
IMG OID642488968 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_001739785 
Protein GI170289547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTTG TCCCGGCGAT AGATCTCTTC AGAGGAAAAG TAGCGAGGAT GATAAAAGGA 
AGAAAAGAGA ACACCATATT TTACGAAAAA GATCCCGTAG AACTGGTGGA AAAACTCATC
GAAGAAGGAT TCACACTGAT TCACGTGGTG GATCTCTCGA ATGCGATAGA AAACAGCGGC
GAGAATCTTC CAGTTCTCGA GAAACTCTCT GAATTTGCCG AGCACATACA GATCGGAGGC
GGGATCAGAT CGCTCGATTA CGCGGAAAAA CTCCGAAAGC TGGGATACAG AAGACAGATC
GTGAGCTCAA AGGTTCTGGA AGATCCTTCT TTCCTGAAAT CCCTGAGAGA AATAGATGTG
GAGCCCGTGT TCAGTCTGGA CACTCGAGGT GGAAGAGTAG CGTTCAAAGG GTGGCTGGCG
GAAGAGGAGA TCGACCCTGT TTCTCTTCTG AAGAGACTGA AAGAATACGG CCTTGAAGAG
ATCGTACACA CGGAGATCGA AAAAGATGGC ACTCTTCAGG AGCACGATTT TTCTCTCACC
AAAAAGATAG CGATCGAAGC TGAAGTGAAA GTACTCGCAG CGGGTGGTAT CTCTTCGGAG
AACTCTTTGA AAACAGCGCA GAAGGTTCAC ACAGAAACGA ACGGGCTTCT CAAAGGTGTG
ATCGTGGGAA GGGCGTTTCT GGAGGGAATT CTCACAGTTG AGGTGATGAA GAGATATGCT
CGCTAA
 
Protein sequence
MLVVPAIDLF RGKVARMIKG RKENTIFYEK DPVELVEKLI EEGFTLIHVV DLSNAIENSG 
ENLPVLEKLS EFAEHIQIGG GIRSLDYAEK LRKLGYRRQI VSSKVLEDPS FLKSLREIDV
EPVFSLDTRG GRVAFKGWLA EEEIDPVSLL KRLKEYGLEE IVHTEIEKDG TLQEHDFSLT
KKIAIEAEVK VLAAGGISSE NSLKTAQKVH TETNGLLKGV IVGRAFLEGI LTVEVMKRYA
R