Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1668 |
Symbol | |
ID | 6093118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1691881 |
End bp | 1693080 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642488869 |
Product | isocitrate dehydrogenase |
Protein accession | YP_001739686 |
Protein GI | 170289448 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGAAGA TCAAGGTTAA AAACCCCATT GTCGAACTCG ACGGTGACGA GATGGCACGC GTGATGTGGA AGATGATCAA AGAAAAACTC ATCCTTCCCT ATCTCGACAT CCAGCTGGTT TACTTCGATC TCGGAATAGA GAAGAGAGAT GAAACAGACG ATCAGATCAC GATCGAAGCG GCAAAGGCCA TCAAAAAGTA CGGTGTCGGT GTCAAGTGCG CAACGATCAC CCCAGATGCG GAAAGAGTGA AGGAATACAA CCTGAAGAAA GCCTGGAAGA GTCCAAATGC CACCATCAGA GCGTACCTCG ATGGAACGGT TTTCAGAAAG CCCATCATGG TGAAGAACGT GCCACCGTTA GTGAAGCGCT GGAAGAAACC GATCATCATA GGAAGGCACG CCTACGGTGA CATATACAAC GCTGTGGAAG CAAAAGTAGA AGGCCCAGCA GAAGTGGAAC TTGTGGTGAG AAACAAAGAA AACAAAACAC TCCTCGTACA CAAATTCGAA GGAAACGGTG TTGTCATGGC GATGCACAAC CTGGAGAAAT CGATCAGAAG TTTCGCTCAG TCGTGTATAA ACTATGCTAT CTCTGAAAAG GTCGACATCT GGTTTGCAAC GAAAGACACG ATCTCCAAGG TGTACCACGC GTACTTCAAA GACATATTCC AGGAAGAGGT CGACAAAAGA AAAGAAGAAC TCGAAAAAGC CGGAGTGAAC TACAGATACA TGCTCATAGA TGATGCGGCT GCGCAGATTT TGAGAAGTGA GGGCGGCATG CTCTGGGCCT GCATGAACTA CGAAGGGGAC ATCATGTCCG ATATGATCGC CTCAGGTTTC GGCAGTCTCG GTCTCATGAC GTCGGTTCTC GTCTCTCCCG ATGGGATCTA CGAGTTCGAG GCAGCCCACG GCACGGTGAG AAGACACTAC TACAGATATT TGAAGGGAGA AAAGACCTCG ACGAATCCAA CCGCATCGAT CTTCGCGTGG ACAGGTGCTA TAAGGAAGAG GGGAGAACTC GACGGAACAC CGGAGGTGTG TGAATTCGCA GACAAACTGG AGAAGGCTGT GATAAACACC ATAGAATCCG ATGTGATCAC AAAGGACCTT CAGCCTTTCA CAGAACCACC GATCGACAAG TATGTCACTC TCGAAGAGTT CATAGACGAA GTGAAGAAGA ATCTCGAAAA ATTACTGTGA
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Protein sequence | MEKIKVKNPI VELDGDEMAR VMWKMIKEKL ILPYLDIQLV YFDLGIEKRD ETDDQITIEA AKAIKKYGVG VKCATITPDA ERVKEYNLKK AWKSPNATIR AYLDGTVFRK PIMVKNVPPL VKRWKKPIII GRHAYGDIYN AVEAKVEGPA EVELVVRNKE NKTLLVHKFE GNGVVMAMHN LEKSIRSFAQ SCINYAISEK VDIWFATKDT ISKVYHAYFK DIFQEEVDKR KEELEKAGVN YRYMLIDDAA AQILRSEGGM LWACMNYEGD IMSDMIASGF GSLGLMTSVL VSPDGIYEFE AAHGTVRRHY YRYLKGEKTS TNPTASIFAW TGAIRKRGEL DGTPEVCEFA DKLEKAVINT IESDVITKDL QPFTEPPIDK YVTLEEFIDE VKKNLEKLL
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