| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1617 |
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| Symbol | |
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| ID | 6093066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1632491 |
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| End bp | 1634311 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642488818 |
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| Product | arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_001739636 |
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| Protein GI | 170289398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3867] Arabinogalactan endo-1,4-beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0588913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGGG TGCTTTTCGT GCTGATGATT TCTTCCATGG CCTTTGGTTT GATAGTCAAC
CCGGTGAAAA ACCTGTGCGA GGATTTCATC TTTGGAATGG ATGTTTCTAT GCTCTACGAG
ATCGAGCAAC TGGGTGGGAA ATATTTCGAG AATGGTGTGG AAAAAGATTG TCTTGAAATA
CTGAAGAATC ATGGAATAAA CTGGATCAGG TTGAGGGTGT GGAATGATCC GAGAGACGAG
AATGGAAATC CTCTCGGAGG AGGAAACTGC GATTACCTGA AGATGACAGA AATCGCTAAA
AGGGCAAAGA AACTCGGAAT GAAAGTGCTT CTTGACTTCC ATTACAGCGA CTGGTGGGCG
GATCCTGGAA AGCAGAACAA ACCAAAAGAG TGGGAATATC TTCATGGAGA ACTTCTGGAG
AGGGCGGTTT ACTCCTACAC GAAACTTGTA CTGAACCACA TGCGAAGAAA CGGGGCACTA
CCAGATATGG TCCAGGTGGG GAATGAGGTG AACAACGGTT TTCTCTGGCC TGACGGCAAG
ATTTCTGGAG AAGGTGCAGG TGGTTTCGAC GGATTCACAA GACTTTTGAA AGCTGCCATC
AAGGCCGTTA GAGAGGTTGA TCCGGATATA AAGATCGTTA TTCATCTGGC GGAAGGTGGA
AACAACTCTC TCTTCAGATG GTTCTTCGAC GAGATCACAA GAAGAAACGT GGACTTCGAT
GTAATAGGTG TATCTTACTA CCCGTACTGG CACGGAACCC TCGAGGATCT GAAAAACAAC
CTCTACGACA TAGCCACAAG ATATAACAAG GATGTGCTCG TTGTTGAAAC AGCTTACGCC
TGGACACTCG AGGATGGAGA TGGTTATCCC AACATCTTCA ATGGTGAAGA AATGGAACTA
ACAGGTGGCT ACAAGGCAAC CGTTCAGGGA CAGGCAACAT TTCTGAGAGA TCTCATGGAA
GTGGTAAACA GCGTTCCCAA CGGCCATGGA CTCGGGATTT TCTACTGGGA AGGAGATTGG
ATCCCTGTGA GGGGGGCTGG ATGGAAAACC GGAGAAGGAA ACCCCTGGGA CAACCAAGCT
ATGTTCGATT TCAGTGGGAA CGCTCTCCCA TCACTGAATG TTTTCAAACT GGTGAAAACA
TCATCGCCAG TGGAGATTGC GATAAAAGAG ATCCTTCCTG TGGAGGTTAC AACCAACCTG
GGAGAGGTTC CAAAATTTCC AGATGCTGTG AAAGTTCTGT TCAGCGACGA TTCCATCAGA
TCTTTACCTG TCGAATGGAA CTTTGATTCT GCCCTTGTTG AAGAATCCGG TGTTTACAAA
GTGGAAGGCT ACATTAAAGA CATTGACCGG AAAATTTTCG CGACACTCAC CGTGAAGGGT
AGCAGAAACT ATCTGAAAAA TCCGGGCTTC GAAACAGGAG AATTTTCGCC TTGGCAGGTC
TCGGGAGACA AAAAAGCGGT GAAAGTTGTA AAAGTCAATC CTTCAAGCAA TGCGCACCAG
GGAGAGTACG CAGTGAATTT CTGGCTCGAT GAATCCTTCA GTTTCGAACT GTCACAAGAA
GTGGAACTTC CAGCAGGTGT GTACAGAGTA GGGTTCTGGA CCCATGGAGA AAAAGGTGTG
AAGATTGCTC TGAAGGTAAG TGATTACGGA GGAGATGAAC GATCTGTAGA AGTTGAAACA
ACGGGCTGGC TCGAATGGAA GAACCCGGAG ATAAGGAACA TAAAAGTTGA AACAGGAAGA
ATAAAGATTA CCGTTTCTGT CGAGGGAAGG GCAGGTGACT GGGGGTTCAT TGATGATTTC
TATCTTTTCA GAGAAGAGTA A
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| Protein sequence | MRGVLFVLMI SSMAFGLIVN PVKNLCEDFI FGMDVSMLYE IEQLGGKYFE NGVEKDCLEI
LKNHGINWIR LRVWNDPRDE NGNPLGGGNC DYLKMTEIAK RAKKLGMKVL LDFHYSDWWA
DPGKQNKPKE WEYLHGELLE RAVYSYTKLV LNHMRRNGAL PDMVQVGNEV NNGFLWPDGK
ISGEGAGGFD GFTRLLKAAI KAVREVDPDI KIVIHLAEGG NNSLFRWFFD EITRRNVDFD
VIGVSYYPYW HGTLEDLKNN LYDIATRYNK DVLVVETAYA WTLEDGDGYP NIFNGEEMEL
TGGYKATVQG QATFLRDLME VVNSVPNGHG LGIFYWEGDW IPVRGAGWKT GEGNPWDNQA
MFDFSGNALP SLNVFKLVKT SSPVEIAIKE ILPVEVTTNL GEVPKFPDAV KVLFSDDSIR
SLPVEWNFDS ALVEESGVYK VEGYIKDIDR KIFATLTVKG SRNYLKNPGF ETGEFSPWQV
SGDKKAVKVV KVNPSSNAHQ GEYAVNFWLD ESFSFELSQE VELPAGVYRV GFWTHGEKGV
KIALKVSDYG GDERSVEVET TGWLEWKNPE IRNIKVETGR IKITVSVEGR AGDWGFIDDF
YLFREE
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