Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1615 |
Symbol | |
ID | 6093064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1628272 |
End bp | 1630005 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642488816 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001739634 |
Protein GI | 170289396 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0464786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAACA TCGTTAAATT GTTTCTCTGG TTTCTTCTTG CCATTTTGAA CATCGCTCTC TTCTGGGCAG GTGTTTTTCT TTTCCAGAAC GAGTATTACG AACTTTCGAT AGTGCTTTTC TCTCTGTTAG TTCTAATAGA TTTCTTCATC ATCAACCCAA AGGGATATCC TTACAGATAC ACCATACCTG CTCTTGTTCT GCTTTTTGTT CTTGTACTCT ATCCGATATA CTTCACCTTC AAAGTGGCAT TCACCAATTA TGGAACGGGC CACTTCATGT CGAGACAGGA AGCTATAGAG AGACTTCTCT ATGACCCAAA TTTTTCCTAT GTGGTAGATT CGACTCCTGT TTCATATAAG GTGTTCGTGG TGTACGACGG CCTCTCTCCC ACTGATGACT TCCTAATACT TTTCAAAACG GGAGATACCA TTTTCCTTGG TGAAAGACCG AAACCAGTTG TCGCACGAGG TCAGGAGGTT CTCCTGAGTC AGTTCAATCT GGTTCCGATC ACGGGTGAAA CGATCTCACT GAACAGCGAC ACCTTCAGGA TTGTTCCATG GCCTGCGGAT CTCTCGGAGA TCAATCTTGT AGTACGTGGT GAGAAGACCT ACAAGAGCTT CTACTCACCC GATGACGAGA TTCTGAGGTT GAATGCACCT TACTTCAAGA GCAGAATAGC TCAGGGTTAT CTGGTGAACG CAGAATACGT GCTTCCCGAT GGAAAAAAAT TGGCCCTGAG AATTGCTCCG GATGGAGAAT GGAGATTCAT GTACGTGGAG AGGCTCTACA GACTGGCTTA CAAAGAAATA TACGACGGTG TGAAAATGAA GATAAAAACC ACAGTAGTGA ACAATCTCAC GGGAAGAGAA GTGGTAGAAC GTGAAGGTGC TTTCTACGAT GTGGACGAAA ATGGGAACGA GACGTTCCTT GTTGGATTCA TAGATTTTGT GGGATGGAAA AACTTCCTGA GGATCGTTAA AGATCCAAAG GTTTCCGGTC CTTTCTTCAG AATATTTCTC TGGACTTTCG TGTGGGCTGT TCTCAGCGTG GTCCTTTCCC TCGCTGTGGG ACTTCCGTTT GCGCTTGTTT TGAACAACCC AAGACTCAAG GGAAGAAACC TCTACAGGAC GCTTCTGATC ATTCCCTGGG CCATTCCAGT TTTCATTTCG GCTCTGGTCT GGCGCAATGG ACTTCTGAAC GAGTCTTACG GTGTGATCAA CAAGTTCCTT TTACCTCTTT TTGGCCTCGA ACCAATAAAA TGGTTCAACG ATCCCTTCTG GGCACGTGTG GGAGTCCTTC TCGTCAACGT CTGGCTCACG TTTCCGTACA TGATGACGAT CTCACTCGGT GCCCTTCAGA GCATTCCACC AGAGCTCTAC GAGGTAGCGG CAATAGACGG TGCAGGAAGA TTCAGGAGAT TCTTACACAT CACCTTTCCA CTCCTTATGA CCATCGTTGC ACCTCTCCTC GTCAGCAGTT TCGCCTTCAG TTTCAACAAC TTCACCATCA TATATCTGAT TACGGGTGGT GGGCCTCCAA TTCCTAACTC GACCACTCCA ACAGGATACA CAGATATTTT GATCTCTTAC GTCTACAAAC TGGCGTTTGA AGGTGGTCAG GGACAGGACT TCGGTTTTGC CAGTGCCATT TCAATACTCA TCTTCTTCCT AGTCGGAGGA ATCAGCTTCG TAAACTTCAA GCTGTCTGGT GCATTCGAAG AGGTGAGCAG ATAA
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Protein sequence | MKNIVKLFLW FLLAILNIAL FWAGVFLFQN EYYELSIVLF SLLVLIDFFI INPKGYPYRY TIPALVLLFV LVLYPIYFTF KVAFTNYGTG HFMSRQEAIE RLLYDPNFSY VVDSTPVSYK VFVVYDGLSP TDDFLILFKT GDTIFLGERP KPVVARGQEV LLSQFNLVPI TGETISLNSD TFRIVPWPAD LSEINLVVRG EKTYKSFYSP DDEILRLNAP YFKSRIAQGY LVNAEYVLPD GKKLALRIAP DGEWRFMYVE RLYRLAYKEI YDGVKMKIKT TVVNNLTGRE VVEREGAFYD VDENGNETFL VGFIDFVGWK NFLRIVKDPK VSGPFFRIFL WTFVWAVLSV VLSLAVGLPF ALVLNNPRLK GRNLYRTLLI IPWAIPVFIS ALVWRNGLLN ESYGVINKFL LPLFGLEPIK WFNDPFWARV GVLLVNVWLT FPYMMTISLG ALQSIPPELY EVAAIDGAGR FRRFLHITFP LLMTIVAPLL VSSFAFSFNN FTIIYLITGG GPPIPNSTTP TGYTDILISY VYKLAFEGGQ GQDFGFASAI SILIFFLVGG ISFVNFKLSG AFEEVSR
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