Gene TRQ2_1606 details

Gene Information

• Locus tag: TRQ2_1606
• ID: 6093055
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: -
• Start bp: 1621054
• End bp: 1622934
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642488807
• Product: NADH dehydrogenase subunit M
• Protein accession: YP_001739625
• Protein GI: 170289387
• COG category: [C] Energy production and conversion; [P] Inorganic ion transport and metabolism
• COG ID: [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACTGG GTCTTCTCCC ATTAGTTCTC CTCACACTTT CCATTTTCAT CTACCTCGTC 
TCGAAGATGA GCTGGAAAAT GGGAGCGCTT CTGAATTTTC TGGCAGGGCT CTTCACTATT 
CTGTACATCT TCACATTGAA GGTGGGCACT TTTGAGAAGC TGGACCTGTT CGGTTTAAAT 
ATCCAGTTTG AATGGACGAA CGTATCTTTC TATTTCTCTT TTGTCAGTCT TCTGGTGATT 
GTGTCCGTGA TGCTCTTTTC CACGAAATGG CTCGAGACTC AAAAGTATCG TGCAAGCTAC 
AATATGTTCC TGCTCATGGT AACGGCGGGA TCACTCGGTG TCTTCATGGC TGCTGATCTC 
ATCACGCTCT ACGTTTTCTG GGAGATAGCA GTTCTCTCTT CGCTACTGAT CGTTCCCATG 
GAAAAGAAAG AGGCACGAAA AGCAGTCGTT GTGTACGCGG TTATGAGTGC TGTGGGAACG 
TACGCTTTCC TCTATGGAAC GTTTCTCGCG TATCAGAGAT ATGGAACGTT GAACATACAC 
GGCATAGCAC AGGGTATGCT CAACGACACT TCGATAGGGT TCAAAATGGC TGTGTTTTTG 
CTCTTGAGCG CGGCCGGTAT AGCAAAAAGT GGAATATTTC CATTACACAT CTGGCTTAGA 
GAGACTCATG GTCTTGCACC AAATGCGTTT TCTTCAGTAC TTTCCGGACA GTTCATCAAA 
CTCGGAAACT ACATCTTTTT ACTCGTTCTC TCCGTTATAC CTTCCTTGAA AGTTTTCTCA 
GAAGTCACCG TTTATTCGGG AATCCCTCTT CCAAACTACA TCCTCATCGC TCTTGGAAAC 
GTGTCGATCG TGATAGGAAC ACTCATGGCA ATAAAGCAAG ATGATATGAA GATGCTCATG 
GCTTATTCCT CGGTTGCGAA CGGAGGTTAC ATCCTGATAG GAATCGGCAC CATGGACCCA 
CTGGGCTTCG AAGGAGGAAT GTTCCACATC TTCAACCACG CAGTCGCTTC TGCGGTTATA 
TTCATGGCTT TCGCTGCGGT CATTTACAGA ACGAAAACAC AGAAGATCAG CGAAATGGGT 
GGTCTGATCC ACAAAATGCC CGTTACTTTC CTGGTTTATC TCTTCTCCAT CATCTCTCTT 
GCCGGAATTC CTCCGATGAG TGGCTTCATC TCGAAGTGGA TGATTTACCA GGCACTGGTC 
AGAAAGGGTA TGTTCATAAC CGCTTTCTTG GCATTCTTTG GATCGATAGG ATCTTTCCTA 
TACGTCTTCA GGCCACTTGC AGGGGTGTTC CTGGGACAGC TTCCCAGAAA GTACAGGGAC 
GTGAAAGAAG CCCCCGCTGT GATGCTGACA CCCATGGTTC TTCTTGTTCT AATCAGTTTC 
TTCTTAGGAG TGTGGCCCTT CCCCATCCTT CAGGTGATCG AAAAAATCAG GGTGGATCTG 
GATGTCGCAC CTTCATTCAA AATATCTGAT CCGGAGAACT GGCTTGTGAA GGGATTCGCG 
GGAAGCTGGA ATCCCGTGCT CGTCTTCGGC CTATTTCTTG TGGGCTTCAT CGTTGCTTAC 
ATCCTTTACT CTCTCTTTCC AAGGCCAAAG AAAGTGGACC TTCTGGCACC TCACAGGGAG 
GAGGGAACGC CCATCAACAT CTACACGGGC GGAGAGTTCA TATACAATCC AGATCTCTAC 
CACTACAACA CGAAATTCTA CGCAGGTTTT GAAAGAATGT ACGAAAAACA TCCATCGTGG 
GAGAAACTCC TCAAAATGTT CGGGAAGCTG TTCCACGACG CCGGAGAATG GATACACAGC 
TGGTTCTTCG AACCTTCCTC CTCGGCTTAC ACTTTCTGGG TTGTTGTGAC TCTACTTCTC 
GTATTCTGGG TGAGGTGGTG A 

 

Protein sequence

MALGLLPLVL LTLSIFIYLV SKMSWKMGAL LNFLAGLFTI LYIFTLKVGT FEKLDLFGLN 
IQFEWTNVSF YFSFVSLLVI VSVMLFSTKW LETQKYRASY NMFLLMVTAG SLGVFMAADL 
ITLYVFWEIA VLSSLLIVPM EKKEARKAVV VYAVMSAVGT YAFLYGTFLA YQRYGTLNIH 
GIAQGMLNDT SIGFKMAVFL LLSAAGIAKS GIFPLHIWLR ETHGLAPNAF SSVLSGQFIK 
LGNYIFLLVL SVIPSLKVFS EVTVYSGIPL PNYILIALGN VSIVIGTLMA IKQDDMKMLM 
AYSSVANGGY ILIGIGTMDP LGFEGGMFHI FNHAVASAVI FMAFAAVIYR TKTQKISEMG 
GLIHKMPVTF LVYLFSIISL AGIPPMSGFI SKWMIYQALV RKGMFITAFL AFFGSIGSFL 
YVFRPLAGVF LGQLPRKYRD VKEAPAVMLT PMVLLVLISF FLGVWPFPIL QVIEKIRVDL 
DVAPSFKISD PENWLVKGFA GSWNPVLVFG LFLVGFIVAY ILYSLFPRPK KVDLLAPHRE 
EGTPINIYTG GEFIYNPDLY HYNTKFYAGF ERMYEKHPSW EKLLKMFGKL FHDAGEWIHS 
WFFEPSSSAY TFWVVVTLLL VFWVRW