| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1605 |
|---|
| Symbol | |
|---|
| ID | 6093054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1620168 |
|---|
| End bp | 1621049 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642488806 |
|---|
| Product | respiratory-chain NADH dehydrogenase subunit 1 |
|---|
| Protein accession | YP_001739624 |
|---|
| Protein GI | 170289386 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0650] Formate hydrogenlyase subunit 4 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG CACTGTTCAA CCTCGTTCTT GCCTTCTTTC TCGTTCTATC TCTTGAGGGA
ATCGCAAGGA AAATAGTCGC GAGGGTCCAG AGGAGAATAG GACCTCCCTG GTACCAGAAC
TTCATAGATG TCTTCAAGGC GCTGTCGAAA CATCCATTCA GCAACGGTTG GATCTTCGAT
TTTGGAGTCC TGATGGCGCT CGGGGGATCC ATCGCAACGG CCATGCTCAT GCCTCTTGGC
TCCTTGAAAT GGACTCCGTT CCCAAACACA GATAACTTCT TCGTGATCAC GTACCTGTTC
ACCGTTGGTG CTCTCGGCAT GGCGATGGGA ATGGTGGGAA GCGGAAACCC CTGGGCTTCC
ATAGGTATAA GCAGGGCGCT CACACAGATG CTCGGCTACG AACTACCGTT CCTGGTCGTT
ATGGCATCCG TCATATTCAA CTATAAAACC GCGTCGATAC ACCAGTTGAT AACCCTTCAA
GGAGAGAAAT GGAACCTGTT CAGTATGCCT CTTGGTGCAA TTGTGGCGTT TATCTCACTC
ATCGGAATGA TGGGAAAGAA ACCCTTCGAC ATCGCTATCG CTCCCGCTGA AATAGCCTCC
GGTCCCATGG TGGAACTGTC TGGAAAGTAT CTCGGTCTTC TTCAGATCAT GCATGACTTC
TCACTGTTCG TGGAAATCTC CCTCTTTGTG AACGTGTTTC TCGGTGGAGG GAGCCTCGGT
TGGTTCCTCG TGAAATTCGT GACCGTCTGG GTCGTAGCAG TTCTCATCTC TTCTGTTCTT
CCGAGGTTCA GAATAGAACA GATGCTGAAG TTCTACTGGG GTGTTCCTCT TGGACTTGCC
TTTTTGAACG CACTCTTTGT GGTGCTCGGT TTGACACTAT GA
|
|---|
| Protein sequence | MIKALFNLVL AFFLVLSLEG IARKIVARVQ RRIGPPWYQN FIDVFKALSK HPFSNGWIFD
FGVLMALGGS IATAMLMPLG SLKWTPFPNT DNFFVITYLF TVGALGMAMG MVGSGNPWAS
IGISRALTQM LGYELPFLVV MASVIFNYKT ASIHQLITLQ GEKWNLFSMP LGAIVAFISL
IGMMGKKPFD IAIAPAEIAS GPMVELSGKY LGLLQIMHDF SLFVEISLFV NVFLGGGSLG
WFLVKFVTVW VVAVLISSVL PRFRIEQMLK FYWGVPLGLA FLNALFVVLG LTL
|
|---|
| |