| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1590 |
|---|
| Symbol | |
|---|
| ID | 6093039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1602708 |
|---|
| End bp | 1603508 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642488791 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001739609 |
|---|
| Protein GI | 170289371 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000388341 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGATAA GAGATAAAAT TCTGAACGTC TACACACAGT TCAGCCCTGC AGAGCGCAAA
GTCGCGGATT ACGTGCTCGA AAGGCCGGAC GATGTCATCC ACTACTCGAT CACAGAGTTC
GCAAAGATCG TGGGTGTGAG CGAAACCACG ATTCACAGGA TGATCAAAAA GCTCGATTTC
GAAGGTTACC AGGCCTTCAA GATCGCACTT GCAAGAGAAC TCAGCGGGCT CGAAGAAACC
ATAGAAAGAA GAGATTTCAT AGACGAGGAG ATAGACATCC TCAGAAGGCT CAAGGACACC
CTCGATATGA AGAACGTGGA AAAGGCGGTG GAGTGGATAC TCTCCGCCCA CCGCATTCTT
TTCTTCGGTG TGGGACTCTC GGGAGTGGTT TCTGAGTACG CGAGCCTGAA GTTCTCTCTT
CTTGGCTTCC ACACGTTCTT TTCCAACGAC CCGCACGTTC AGGTGATAGA GGCCGTGAAT
CTGACCGGTG AAGACCTGGT GATCTCGATC AGTCACACGG GAAACATCAG AGACACGGTG
AAATCCACCC AGGTGGCAAA AGACATGGGA GCGAAGACGA TCGCAATCAC AACGAACAGA
CAGTCAGAAC TCGCCAAGGT GGTTCATCTG GTGCTTCAAA GCCCGCCCGT GAAGTACGAC
ACCTACGAAT TCCTCAGGGA GAACATCGGA GAGATCGCCG TTGTGGATGT GCTCTTCAAG
GAAACGTTCC AAAGAATATA CCGGGAGAGG AAGAAACACT TCGAAAACCT GGAAGGAGTG
TTCAAACCGA AGAGATTTTG A
|
|---|
| Protein sequence | MKIRDKILNV YTQFSPAERK VADYVLERPD DVIHYSITEF AKIVGVSETT IHRMIKKLDF
EGYQAFKIAL ARELSGLEET IERRDFIDEE IDILRRLKDT LDMKNVEKAV EWILSAHRIL
FFGVGLSGVV SEYASLKFSL LGFHTFFSND PHVQVIEAVN LTGEDLVISI SHTGNIRDTV
KSTQVAKDMG AKTIAITTNR QSELAKVVHL VLQSPPVKYD TYEFLRENIG EIAVVDVLFK
ETFQRIYRER KKHFENLEGV FKPKRF
|
|---|
| |