| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1583 |
|---|
| Symbol | |
|---|
| ID | 6093032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1593785 |
|---|
| End bp | 1595047 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642488784 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001739602 |
|---|
| Protein GI | 170289364 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000175887 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAAGT GGTTGTTTTT CATGGTTCTT CTGATCGTTG CGGGTCTCAT GTTCGGAAAG
GTGAACTTCG CGTCCACACA GATGACACCC GCTGCTGAAA GGGAGTTCAT GCTCAACAAA
CTCGCGGAAT TTTCGAAGAA GAGCGGTATC GATGTGGAGT TCCTCAACTT CGAGTATCCA
CAGCTCTACA GCAGGCTCCA GGCGGAGATC AGAGCCGGTA AAAATACGCT GAACCTGATT
GCAGACCTCC AGGGAAACCT CTACATAATG GCCTCTGAAG GATTCCTCAG TGATCTCAAG
GATCTCAAAT TCGAAGGAAA AACCTTCATC GAGACGCTTG AGAAGTTCGC TTATGTGAAA
GGTGAAAAGG TGTTCATTCC CTGGCTCCAG GCAACTTACG TGATGGCCGT TAACAAAAAG
GCGTTTGACT ACCTGCCGCG CGGTCTTTCG AAAGAAGACG TCATCAGGGG GACGGAGAAG
TGGACTTACG ACGCTCTGCT CGAGTGGGCA AAGAACATCT ATGAGAAGAC GAAACAACCC
CTTCTTGGCT TCCCGATCGG ACCGAAGGGA CTCTGGCACA GGTTCCTCCA CGGCTACATC
TATCCATCCT TCACGGGAGC GCAGGCTCTG AAGTTCGACA GTGTGAGGGC CGTTGAAATG
TGGAACTATC TGAAGGAGCT CTTCAAATAC GTACATCCGG CAAGCTCCAC CTGGGACGGG
ATGGCCGATC CTCTCCTGAG AGAAGAAGTC TGGATCGCCT GGGATCACAC TGCAAGACTC
AAACCCGCGA TCGTTGAAAA GCCTAACGAT TTCGTTGTTG TACCGGTCCC AAGAGGGCCG
ATGGGTAGAG GGTACATCAT AGTGCTCGTG GGCCTTGCCA TACCGAAGGA TGCGGACTTC
GAAGAACCCG CGAAAGTGAT AGACTTCCTC ACTTCTCCAG AGATGCAGGT TGAAATCCTC
AAGAACGTCG GTTTCTTCCC AGTGGTTCAG GAAGCCGTTG GTGCCGTGCC AGAAGGTGCC
CTCAAAGTGC TCGCAGAAGG TGTGATAAAT CAGTCCGCCA CGAAGGATTC TATCGTTTCC
TTCATACCGA GTCTTGGACC AAAGAGCGGA GAGTTCACCG AAACCTACAG AATGGCCTTC
ACGAGGATCG TCTTCCAGGG TGAAGACCCA GCGAAGGTAG TGAAGGAACT CGGTGAGCGA
ATCAGACAGC TGTTCAAAGA ATCCGGAGCG GAACTTCCAG AACCCGACGC AAGTCTCTTC
TGA
|
|---|
| Protein sequence | MRKWLFFMVL LIVAGLMFGK VNFASTQMTP AAEREFMLNK LAEFSKKSGI DVEFLNFEYP
QLYSRLQAEI RAGKNTLNLI ADLQGNLYIM ASEGFLSDLK DLKFEGKTFI ETLEKFAYVK
GEKVFIPWLQ ATYVMAVNKK AFDYLPRGLS KEDVIRGTEK WTYDALLEWA KNIYEKTKQP
LLGFPIGPKG LWHRFLHGYI YPSFTGAQAL KFDSVRAVEM WNYLKELFKY VHPASSTWDG
MADPLLREEV WIAWDHTARL KPAIVEKPND FVVVPVPRGP MGRGYIIVLV GLAIPKDADF
EEPAKVIDFL TSPEMQVEIL KNVGFFPVVQ EAVGAVPEGA LKVLAEGVIN QSATKDSIVS
FIPSLGPKSG EFTETYRMAF TRIVFQGEDP AKVVKELGER IRQLFKESGA ELPEPDASLF
|
|---|
| |