Gene TRQ2_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1550 
Symbol 
ID6092998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1560747 
End bp1561886 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content47% 
IMG OID642488750 
Productcystathionine gamma-lyase 
Protein accessionYP_001739569 
Protein GI170289331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATAG ACGACATCCT GTTCTCGTAC GGGGAAGAAG ATGTCCCTTT CAAAGCGCTG 
TCGTTTCCCA TCTTCGAAAC GACTAATTTC TACTTCGACA GTTTCGACGA GATGTCAAAA
GCCCTCAGAA ACGGAGACTA CGAATTCGTT TACAAAAGAG GAAGCAATCC CACAACAAGA
TTGGTGGAGA AGAAACTGGC AGCGCTGGAG GAGTGTGAAG ATGCCCGTCT TGTTGCTTCT
GGAATGAGTG CCATTTCGCT TTCCATCCTT CACTTCCTCA GCTCGGGAGA TCACGTCGTG
TGTGTGGACG AAGCTTACTC CTGGGCGAAG AAGTTCTTCA ACTACCTTTC AAGGAAGTTC
AATATAGAAA TCAGCTACGT TCCTCCAGAT GCGGAAAAAA TAGTCGAAGC CATCACGAAG
AAGACAAAGC TCATCTACCT CGAAAGTCCC ACAAGTATGA GGATGAAAGT GATCGACATA
AGAAAGGTCA CAGAAACAGC AAGAGAACTC AAGATAAAAA CCATCATAGA CAACACCTGG
GCGTCGCCGA TCTTTCAAAA GCCAAAGCTT CTGGGAGTGG ATGTGGTGGT CCACTCTGCG
ACGAAGTACA TCTCAGGACA CGGAGACGTG ATGGCGGGAG TGATCGCAGG AGACGTCGAA
GATATGAAGA ACATCTTCGT CGATGAATAC AAAAACATCG GACCGGTTCT CTCGCCCATA
GAAGCCTGGC TCATTTTGAG GGGTCTTAGA ACGCTGGAAC TCCGTATGAA AAAGCACTAC
GAAAACGCTC TTTTGGTGTC TGACTTCCTC ATGGATCACC CGAAGGTCCT AGAGGTGAAC
TACCCGATGA ATCCAAGATC ACCGCAGTAC GAACTCGCTT CCTCTCAGAT GAGCGGTGGC
TCAGGATTGA TGAGCTTCAG GCTGAAAACA GACAGCGAAG AGAAAGTAAA AGAATTCGTC
GAAAGTCTGA AGGTTTTCAA GATGGCTGTG AGTTGGGGAA GCCACGAAAA CCTTGTTGTT
CCAAGAGTAG CGTACGGTGA CTGTCCTAAG GAGGACGTGA ACCTCATCAG GATACATGTT
GGCATCGGAA ATCCTGAGAA ACTCGTGGAA GACCTCGATC AGGCACTCAA AAAAATATGA
 
Protein sequence
MNIDDILFSY GEEDVPFKAL SFPIFETTNF YFDSFDEMSK ALRNGDYEFV YKRGSNPTTR 
LVEKKLAALE ECEDARLVAS GMSAISLSIL HFLSSGDHVV CVDEAYSWAK KFFNYLSRKF
NIEISYVPPD AEKIVEAITK KTKLIYLESP TSMRMKVIDI RKVTETAREL KIKTIIDNTW
ASPIFQKPKL LGVDVVVHSA TKYISGHGDV MAGVIAGDVE DMKNIFVDEY KNIGPVLSPI
EAWLILRGLR TLELRMKKHY ENALLVSDFL MDHPKVLEVN YPMNPRSPQY ELASSQMSGG
SGLMSFRLKT DSEEKVKEFV ESLKVFKMAV SWGSHENLVV PRVAYGDCPK EDVNLIRIHV
GIGNPEKLVE DLDQALKKI