Gene TRQ2_1523 details

Gene Information

• Locus tag: TRQ2_1523
• ID: 6092971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 1530711
• End bp: 1531376
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642488725
• Product: ribonuclease H
• Protein accession: YP_001739544
• Protein GI: 170289306
• COG category: [R] General function prediction only
• COG ID: [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAAAAA AATACTACGC TGTAAGAAAA GGAAGAGTTC CCGGGATCTA CAAAACCTGG 
AAAGAGGCGG AAGAACAGGT AAAAGGTTTC CCGGGAGCCG AGTACAAAAG TTTTGAAAGA 
CTGGAAGACG CGAAAGCCTA TATGGAAGGA AAGAACGAGT GCATCTGTCC AGAACTGGAC 
ACAGAGACGA TGATCGCGTA CATCGATGGA AGTTACGATG AGGTGTGCGG ATCCGGAATT 
GTTTTGTGCT ATAGAGGAAA AAAGGAAGAA TACTACTTCT GGACGAACAT CGGGGAGTTC 
AAAGACTCAA GAAACATCAC CGGTGAAATT ATGGCGGCAC TCTTTGCGAT GGATTACGCT 
CTCAAAAAGG GAGCGAGAAA ACTCGTTCTC AGGTACGACC TTGAAGGTCT GGAAAAGTGG 
GCAACGGAGG AGTACAGGAC AAACAAGCTG GTAACGAAGG TGTACAGACA CTACTATCGA 
AAATTCTGTC AGATGGGACT GAAGGTGGTA TTCGAAAAGA TAAAAAGCCA CTCCGGGAAC 
TTCTGCAACG ACGAGGCTGA CAGTCTGGCA AAGAAAGCCG CTAAAAAAGA ATCAAACGTC 
GAGTGGATGC CGGAGGATTT TGAGAGTATA ATAAGAACAC TGACTAAAAA AGGAGGATGT 
TTATGA 

 

Protein sequence

MAKKYYAVRK GRVPGIYKTW KEAEEQVKGF PGAEYKSFER LEDAKAYMEG KNECICPELD 
TETMIAYIDG SYDEVCGSGI VLCYRGKKEE YYFWTNIGEF KDSRNITGEI MAALFAMDYA 
LKKGARKLVL RYDLEGLEKW ATEEYRTNKL VTKVYRHYYR KFCQMGLKVV FEKIKSHSGN 
FCNDEADSLA KKAAKKESNV EWMPEDFESI IRTLTKKGGC L