Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1470 |
Symbol | |
ID | 6092916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1477860 |
End bp | 1480127 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642488676 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001739497 |
Protein GI | 170289259 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.797654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCCGG AGAGACTGAA ACAGATAAAG GGAATAAGGA TTCTGGAAAG CGAGGATGAA ATCCCTCAGG AAGGTTTCAC CTGCAGATTT GGAAAGCATA CAGTTGTGGC AAATGATGAA GAGTCTTTCG AAATCGTCAG ACTCTACAAA AGGCTCACCG TTTATGAGCT GTTGCTCTCT CTTGTGGATT CAATATGTGT TCACCCGAAA GAGGAAGCTC TCAGGTTTTC CCTCAAAAAA GTCAGAGAAT TTCTGGATGC GGAAGAAGTC TATCTGATAG AGGGCGATGC TTCTTATTCT TCGAAGGGAG AGAAACTCTC CATCGATGAG ATAAAAAAGA AACATCCAGG GGCGAGTGTG AGAGAGTGGA GGAACAAACT GCATCTTGTT GTGGTTCGCG AAGGCGCATT CGATGAAGAA GAAGAGGTAC TCTGTACGAA ACTTTTAGAA TTCATCGGAA ACGTATCAGA AAAACTCTGG AGGCTTAAAG AAGAAGTCCA GAAATTGAAA AAGTCGTACG AAGAACAGCT GAAAGTTTCA GAGATACAGA AAGAACACAT AAAGAAAATG AGAATAATTT ATTACGTCAG CCAGGCCATG AGATCTGTTT ATGATCCGAA CAACCTTTAC CGTGTGATTT TGCTCAGCCT TGTTTCAGAG AGAGGATTCA ATTTCGACCG TGCTGTTCTT CTCAAAAAAG ATGAAGGTAC AGGCTCTCTG ATGGTCGTTT CCGCGGTGGG TGGCGATACA CTTCAGGAAC ACGAAGAACT CAAGAGATAC CTCAGAAAAA GAACCTTGAG ATACACAGAT CTGGTACAGT TTTTAAGGGA GGAGGCGCTC ACATTCTCGT TTGAAACGAA GTTCAATGAA AAAATAAGGG GAAAGAGATT TTACTACAGA GAACATCCGA TATTCGAAAG GGTGGTTTTG AGAAAGAGTA TAGTGAGGAC TTCGAGAGAA ACTCTCGAAA AAATCAGGTA CGAAATAGAA GATGTTATAA GTATCCTTGA AAACGATGAG TTCATAGTCT TTCCACTTGT TGGGCGATGG GACACTCTCG GTGTTGTGGT GGTGGACAAC AAATTCAGCA AAAAGGAAGT CACCGATCTG GATCTGGACG TGCTCAAACT TTTCTCTGAA AGTGCAGGTC TTGCTCTGGA GAACGCGTAC AATTATGAAA GTTTGAGAGA GAAAACACTG GATCTTCAAC GTCAAAACGA ACTTGTGGAA CACCTCAGGA ACTTCAGTGA AAGCATTCTG GAGAGCTTAG AAACAGCCAT CATAACGCTG AGCAAAGAAG GACGTGTAAC CGAATGGAAC AAAAAGGCCG AACAACTGTT TGGTCTGAAG AAAGAAAACG TACTCGGAAG AAGGCTCAAA GATCTCCCCG ACTTTGAAGA GATCGGATCA GTCGCAGAAA GCGTTTTTGA AAACAAAGAA CCCGTGTTTC TCAACTTCTA CAAATTCGGA GAAAATTATT TCAACATAAG ATTCTCCCCT TTCAGAAATG CCAAAACACA GTTGCTCGAG GGAGTCATCA TCACGATCGA CGATGTCACA GAGCTGTACA AATACGAAGA GGAAAGAAAA AGAAGAGAAA GACTTTCCAT ACTGGGAGAG ATGACTGCAA GAGTCGCTCA CGAGATAAGG AATCCAATAA CGATAATAGG CGGTTTCATA ATGCGCATGA AGAAACATCT TGACGATCCA GAGACGCTGA AGAAATACAT CAACATAATA ACGAACGAAC TATCCAGGCT TGAAACGATT GTCAAGGAAA TCCTGGAATA CAGCAAAGAA CGGCAGGTGC TGGAATTCAC CGAATTCAAT CTGAACGAAC TCATAAGAGA GGTCTACGTT CTATTCGAGG AAAAGATCAG AAAGATGAAC ATAGATTTTT GCTTTGAAAC GGACAACGAA GACCTCAGAG TTGAAGCCGA TAGAACGAGG ATAAAACAGG TACTGATAAA CCTTGTTCAA AATGCAATAG AAGCGACAGG GGAAAATGGT AAGATAAAGA TAACGTCGGA AGATATGTAC ACCAAGGTGA GAGTGAGTGT CTGGAACTCG GGTCCCCCCA TACCGGAGGA GCTGAAAGAA AAGATATTCT CACCGTTCTT CACCACAAAG ACTCAGGGAA CAGGTTTAGG ACTTTCAATC TGCAGAAAGA TCATAGAGGA TGAACACGGA GGAAAAATAT GGACGGAAAA CAGAGAAAAC GGGGTTGTTT TCATCTTTGA AATTCCAAAG ACACCAGAAA AGAGGTGA
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Protein sequence | MVPERLKQIK GIRILESEDE IPQEGFTCRF GKHTVVANDE ESFEIVRLYK RLTVYELLLS LVDSICVHPK EEALRFSLKK VREFLDAEEV YLIEGDASYS SKGEKLSIDE IKKKHPGASV REWRNKLHLV VVREGAFDEE EEVLCTKLLE FIGNVSEKLW RLKEEVQKLK KSYEEQLKVS EIQKEHIKKM RIIYYVSQAM RSVYDPNNLY RVILLSLVSE RGFNFDRAVL LKKDEGTGSL MVVSAVGGDT LQEHEELKRY LRKRTLRYTD LVQFLREEAL TFSFETKFNE KIRGKRFYYR EHPIFERVVL RKSIVRTSRE TLEKIRYEIE DVISILENDE FIVFPLVGRW DTLGVVVVDN KFSKKEVTDL DLDVLKLFSE SAGLALENAY NYESLREKTL DLQRQNELVE HLRNFSESIL ESLETAIITL SKEGRVTEWN KKAEQLFGLK KENVLGRRLK DLPDFEEIGS VAESVFENKE PVFLNFYKFG ENYFNIRFSP FRNAKTQLLE GVIITIDDVT ELYKYEEERK RRERLSILGE MTARVAHEIR NPITIIGGFI MRMKKHLDDP ETLKKYINII TNELSRLETI VKEILEYSKE RQVLEFTEFN LNELIREVYV LFEEKIRKMN IDFCFETDNE DLRVEADRTR IKQVLINLVQ NAIEATGENG KIKITSEDMY TKVRVSVWNS GPPIPEELKE KIFSPFFTTK TQGTGLGLSI CRKIIEDEHG GKIWTENREN GVVFIFEIPK TPEKR
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