Gene TRQ2_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1467 
Symbol 
ID6092913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1473637 
End bp1474719 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID642488673 
Producttwitching motility protein 
Protein accessionYP_001739494 
Protein GI170289256 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGACA TGAAAGTTTC TTTTCTGAAG ATCATCACAG AAGCGTACGG TTTGAGGGCA 
ACCGACGTGC ACATTTCGGT GGGTTGCCCT CCTTATTACC GTATAGATGG GGACCTTGTA
CCTCAGGAAA AGTACGGAAA ACTCACAAAA GAGACCATAA TGAACGCCCT GAAAGATCTG
TTCGCTGAGA TCGGACAGCC GTTCCCACCT AAAACGAAAG AAGTGGATTT TTCCTTCACC
GTGGCAGAAG CGATAAGGGT GAGGGGAAAC CTCTATTACG AGAGAAAAAA CCCCGCTCTC
GCTTTCAGGT TGATACCAAA AAAGATCAGA ACTTTCCAGG AACTGGGACT ACCAGAGATC
TTGAAAACAT TCGTTGAGAG AAAGTACGGC TTGATATTGG TGGCTGGTCC CACAGGAAGC
GGAAAATCCA CCACACTCGC CGCCATGATA GATCACATCA ACGAAAATTT CCCATACCAC
ATAATAACGA TAGAAGACCC GATAGAATAC GTTTTCACAA ACAAGAAATC CGTGATTCAC
CAGAGAGAAC TCGGTTCAGA CACGGACTCT TTCTACAACG GACTGAAGTA CGCTCTGAGG
CAGGACCCGG ATGTGATCCT CGTGGGAGAA ATGAGAGACC TTGAAACAAT GGCTCTCGCT
CTCACCGCGG CGGAAACAGG ACATCTTGTC CTTGCCACGG TTCACACGAA CTCTGCAGCT
TCCGCACCCG AGAGAATCAT AGATGTTTTC CCGGCACATC AGCAAAGACA GATCGCTCTT
CAGCTTGCGA ACACCTTGAT CGCCGTGATT TATCAGAGGC TTGTCCCGAA GGCCAACGGA
ATAGGTTTTA CTCCGATCCT GGAGATCATG GTGGGAACTC CTGCCGTGAG GAACCTGATA
AGAGAGAACA AGATCCACCA GCTCGAATCT CTGATACAGG CTGGTGCAAG GCACGGAATG
GTTCTCTTCG ATGACGCACT CGTGAAAGCG GCACTCAAAG GTGATATATC CTTAGAATCC
GCTCTGCAGT TTGCCAGGAA CCATGAGGAG GTGGCTCGAA GATTAGGAAT GAAGCCCTCG
TAG
 
Protein sequence
MEDMKVSFLK IITEAYGLRA TDVHISVGCP PYYRIDGDLV PQEKYGKLTK ETIMNALKDL 
FAEIGQPFPP KTKEVDFSFT VAEAIRVRGN LYYERKNPAL AFRLIPKKIR TFQELGLPEI
LKTFVERKYG LILVAGPTGS GKSTTLAAMI DHINENFPYH IITIEDPIEY VFTNKKSVIH
QRELGSDTDS FYNGLKYALR QDPDVILVGE MRDLETMALA LTAAETGHLV LATVHTNSAA
SAPERIIDVF PAHQQRQIAL QLANTLIAVI YQRLVPKANG IGFTPILEIM VGTPAVRNLI
RENKIHQLES LIQAGARHGM VLFDDALVKA ALKGDISLES ALQFARNHEE VARRLGMKPS