Gene TRQ2_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1449 
Symbol 
ID6092893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand- 
Start bp1458544 
End bp1459212 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID642488653 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001739476 
Protein GI170289238 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.110046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTCATC TTTTCTACGG AACGGCTCAA AACGGTGAGG TGATATTCGA CGAAAGAGAA 
GCACACCACA TGAGGGTCGT GCGTTTGAAA GAAGGAGATG TGATCGAAGC AACAGATGGA 
AAAGGCTTTT CATACACGTG CATTCTTGAA AGTTTGAAGA AAAAAACGGC TGCAGCCAGG 
ATCGTAAAGG CAGAAGAGAA AGAAAAAGAA CCCACTGAGA AATTGAGCGT TGTTGTTCCG 
ATCGGCAGGT GGGAAAGAAC ACGTTTTCTC ATAGAAAAGT GTGTTGAACT CGGGGTGGAC 
GAGATCTTTT TCCACAAATT TGAAAGATCC CAGCACGAGA TCAGCCTGGA TAAGGCAAAA 
ATCGTTGTTA GAGAGGCAGC CAAGCAGTGT AAGAGATATC TTTTTCCAAA GGTGAGTTTT 
CTGGAAAAAC TGGAGTTCAG TGGAAACGTG ATAACACTGG ATCTGGATGC CTCTCAAAAC 
CTGCTCGACG CGAACTTAGA AGGCTCGATA ACGGTGGTGG TCGGTCCTGA GGGAGGGTTC 
TCTGAGAAAG AAAGAGAATT ACTGAGATCT TCTACAACCA TTGTGAGTCT TGGAAAAAAG 
ATCCTCAGAT TCGAAACAGC TGCAATATTG ACCGTTGGAT ACATCGCTTT AAAAAAACAA 
AAAATCTGA
 
Protein sequence
MPHLFYGTAQ NGEVIFDERE AHHMRVVRLK EGDVIEATDG KGFSYTCILE SLKKKTAAAR 
IVKAEEKEKE PTEKLSVVVP IGRWERTRFL IEKCVELGVD EIFFHKFERS QHEISLDKAK 
IVVREAAKQC KRYLFPKVSF LEKLEFSGNV ITLDLDASQN LLDANLEGSI TVVVGPEGGF 
SEKERELLRS STTIVSLGKK ILRFETAAIL TVGYIALKKQ KI