| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1410 |
|---|
| Symbol | |
|---|
| ID | 6092852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1418718 |
|---|
| End bp | 1419791 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642488612 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001739437 |
|---|
| Protein GI | 170289199 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0216464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGA TCGAGCTGAG GCACATTCTC CATATGAATC CGGAGCTTTC TTTCAAGGAG
TACAATACAA AAGAAACGCT CAGAAGAGCA GTGATTGAGA TCGGATACGA TAAGATCATA
GAAGTGGCCG GAACAGGACT TGTGATAGAG AAGAAAGAAA CGGAAGATCC GTACGTTGTT
CTGAGAGCCG ATATGGATGC TCTACCCATA AAAGAAGAAA CGGGCTGGGA GTTTGCGTCG
CGGAATGAGT ATATGCACGC GTGCGGACAC GACTTTCACA TGAGCGCACT CTACGGTGCT
ATGAAGAGAC TCAGGAACGT GAAAAAGAAC TTTCTCTTTG TCTTTCAACC TGCCGAAGAG
ACGGGTGGTG GAGCGAAAAA AGTTGTGGAC TTTCTCAGAT ATAGGTACGA AATAAAAGCC
GCTGTTGGAT TCCACGTGAC TGACGAGTAC GATGCTGGAA CTGTGGCATC CCGACCCGGA
GTGCTTTTTG CCTCTGCCAC GGAATTCGAT GTATACTTTA AAGGTGTCCC GGCACACGTG
GCGTTCGCTG AGAAGGGAAA GGACGCTCTG AAGACAGCGG TTTCTTTTCT CGGCTGGCTC
TACAACAAAA AATGGAACGC TCTTGTGGGG GTTGGCAAAA TCTCGGGGGG ACGGGCGAGG
AACATCGTTC CAGATGAGAT AAAATTGGAA GGAACGATAA GATCAGAAGC GCTGAGGATA
ACAGAAGAAG TGATATCCGA CATGGTAAAA CAACTTGGAG AACTGAAAGA AGAAACAGGG
GTTGGTTTTG CTGTTGAAAG AGGCAGTGTC TATCCTGAAG TGAGGGTGAA TCAAAACCTC
TTTGAAACTC TAAGAGCAAC CTGTCAGAGG TTAGGGTTTT CTTTCGTTGA ATGCGATATG
AAGTGGACCG GAGAGGACTT TGGATATTTC TCGCAGGTGT TTCCTTCTCT CTCATTCTGG
TTTGGCGTGG GAGAAGGAGA ACGTTTCGGG CTTCACCACC CGCGTTTTTT ACCGAATGAC
AGGTATATAC CCATGGCGGC GGATCTTTTG GCTGAGCTTG CTATGGTCAT TTGA
|
|---|
| Protein sequence | MNEIELRHIL HMNPELSFKE YNTKETLRRA VIEIGYDKII EVAGTGLVIE KKETEDPYVV
LRADMDALPI KEETGWEFAS RNEYMHACGH DFHMSALYGA MKRLRNVKKN FLFVFQPAEE
TGGGAKKVVD FLRYRYEIKA AVGFHVTDEY DAGTVASRPG VLFASATEFD VYFKGVPAHV
AFAEKGKDAL KTAVSFLGWL YNKKWNALVG VGKISGGRAR NIVPDEIKLE GTIRSEALRI
TEEVISDMVK QLGELKEETG VGFAVERGSV YPEVRVNQNL FETLRATCQR LGFSFVECDM
KWTGEDFGYF SQVFPSLSFW FGVGEGERFG LHHPRFLPND RYIPMAADLL AELAMVI
|
|---|
| |