Gene TRQ2_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1396 
Symbol 
ID6092838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1405951 
End bp1407153 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content49% 
IMG OID642488598 
Productelongation factor Tu 
Protein accessionYP_001739423 
Protein GI170289185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG AAAAATTTGT AAGAACAAAA CCGCATGTTA ACGTTGGAAC GATTGGACAT 
ATCGACCACG GAAAGTCCAC ACTGACAGCC GCTATAACAA AGTACCTTTC TCTCAAGGGA
CTTGCCCAGT ATGTTCCTTA CGACCAGATC GACAAGGCTC CTGAGGAAAA GGCAAGAGGA
ATCACCATCA ACATCACACA CGTTGAGTAT CAGACCGAAA AGAGGCACTA CGCTCACATT
GACTGTCCTG GTCACGCGGA CTACATCAAG AACATGATCA CCGGAGCGGC TCAGATGGAC
GGAGCCATCC TTGTTGTCGC TGCAACCGAT GGTCCCATGC CTCAGACAAG GGAACACGTG
CTTCTTGCAA GGCAGGTTGA GGTTCCCTAC ATGATCGTCT TCATAAACAA GACGGACATG
GTTGACGATC CTGAACTCAT CGACCTCGTC GAGATGGAAG TGAGAGACCT TCTGAGCCAG
TACGGTTACC CTGGAGACGA AGTGCCAGTC ATAAGAGGTT CTGCTCTGAA AGCCGTCGAA
GCTCCTAACG ATCCGAATCA CGAAGCTTAC AAACCTATCC AGGAGCTCCT CGACGCTATG
GACAACTACA TTCCTGAGCC TCAGAGAGAA GTTGATAAGC CGTTCCTCAT GCCTATTGAG
GACGTGTTCT CAATCACAGG AAGAGGAACG GTTGTTACAG GAAGGATCGA AAGAGGAAGA
ATCAAACCCG GTGATGAAGT TGAGATCATA GGTCTCAGCT ACGAAATCAG GAAAACCGTT
GTTACAAGCG TGGAAATGTT CAGAAAGGAA CTCGATGAAG GAATCGCAGG AGACAACGTT
GGATGTCTGC TCAGAGGAAT CGACAAGGAC GAAGTTGAGA GAGGACAGGT TCTCGCAGCT
CCTGGAAGCA TCAAACCACA CAAGAGATTC AAGGCTCAGG TTTACGTCCT GAAGAAGGAA
GAGGGAGGAA GACATACACC GTTCACAAAA GGTTACAAAC CCCAGTTCTA CATAAGAACC
GCTGACGTTA CAGGGGAAAT CGTAGGACTT CCTGAAGGTG TCGAAATGGT TATGCCTGGA
GACCACGTCG AAATGGAAAT AGAACTCATC TACCCTGTCG CTATTGAAAA GGGACAGAGA
TTCGCTGTAA GAGAAGGTGG AAGAACAGTT GGAGCTGGTG TGGTCACAGA AGTCATCGAG
TGA
 
Protein sequence
MAKEKFVRTK PHVNVGTIGH IDHGKSTLTA AITKYLSLKG LAQYVPYDQI DKAPEEKARG 
ITINITHVEY QTEKRHYAHI DCPGHADYIK NMITGAAQMD GAILVVAATD GPMPQTREHV
LLARQVEVPY MIVFINKTDM VDDPELIDLV EMEVRDLLSQ YGYPGDEVPV IRGSALKAVE
APNDPNHEAY KPIQELLDAM DNYIPEPQRE VDKPFLMPIE DVFSITGRGT VVTGRIERGR
IKPGDEVEII GLSYEIRKTV VTSVEMFRKE LDEGIAGDNV GCLLRGIDKD EVERGQVLAA
PGSIKPHKRF KAQVYVLKKE EGGRHTPFTK GYKPQFYIRT ADVTGEIVGL PEGVEMVMPG
DHVEMEIELI YPVAIEKGQR FAVREGGRTV GAGVVTEVIE