| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1393 |
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| Symbol | rplD |
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| ID | 6092835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 1404222 |
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| End bp | 1404929 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642488595 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001739420 |
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| Protein GI | 170289182 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000162338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCAGG TGGATCTGTT GAATGTGAAG GGAGAAAAAG TAGGGACCCT GGAAATCAGT
GATTTCGTTT TCAACATCGA TCCCAACTAC GACGTGATGT GGAGATACGT GGATATGCAG
CTCTCCAACA GGAGAGCTGG AACTGCCTCT ACGAAAACAA GAGGAGAAGT CTCCGGTGGT
GGCAGAAAAC CCTGGCCGCA GAAACACACC GGAAGAGCAA GACACGGTTC CATAAGATCC
CCCATCTGGA GGCATGGAGG AATTGCACAC GGACCTAAAC CGAGAGACTG GAGCAAAAAG
CTCAACAAGA AAATGAAGAA GCTCGCTCTG CGATCTGCTC TCTCTGTGAA GTACAGAGAA
AACAAACTCT TCGTACTCGA TGATCTGAAA CTCGAAAGGC CGAAGACGAA ATTTCTGAAG
GAAATCCTCC AGAACCTTCA GCTTTCCGAC AAGAAAACAC TGATCGTCCT TCCATGGAAA
GATGAAGGAT ACATGAATGT GAAACTCTCT GGAAAGAACC TTCCCAACGT GAAGGTAATA
ATTGCGGACA ATCCGAACAA CAGCAAAAAT GGTGAGAAGG CAGTAAGAAT AGATGGACTC
AATGTTTTTG ACATGCTCAA GTACGATTAC CTTGTGCTCA CCCAGGACAT GGTTTCCAAG
ATAGAGGAGG TGCTCGGAAA TGAAGCAGGA AAAGCTCTCA CTGAATGA
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| Protein sequence | MAQVDLLNVK GEKVGTLEIS DFVFNIDPNY DVMWRYVDMQ LSNRRAGTAS TKTRGEVSGG
GRKPWPQKHT GRARHGSIRS PIWRHGGIAH GPKPRDWSKK LNKKMKKLAL RSALSVKYRE
NKLFVLDDLK LERPKTKFLK EILQNLQLSD KKTLIVLPWK DEGYMNVKLS GKNLPNVKVI
IADNPNNSKN GEKAVRIDGL NVFDMLKYDY LVLTQDMVSK IEEVLGNEAG KALTE
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