| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1380 |
|---|
| Symbol | rpsH |
|---|
| ID | 6092822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1398822 |
|---|
| End bp | 1399226 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642488582 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001739407 |
|---|
| Protein GI | 170289169 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00507298 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGGAGCG ATCCAATTGC CGACATGCTA ACAAGAATCA GAAATGCCAA TATGGTTTTC
AAAGAATATA CGGATATACC TGCTTCTAAC CTCAAGAAGA AGATCTGCGA GATCCTGAAA
AGAGAAGGAT TCATAGCGGA CTACAAATAC ATCGAGGATG GAAAGCAGGG AATACTGAGG
GTTTACCTCA AATACAAAGG CGGAAGGAAG AACAGAGAAA GAGTCATTCA CGGTATCGTC
AGAGTGTCTC ACTCAGGTAG GAGAATTTAC GTTGACAAGG ATCATATTCC AAAAGTGAAA
AACGGTCTTG GAATAGCTAT ACTCACTACT TCGAAGGGCG TTCTAACAGA TAAAGAAGCT
CGTCAGCTTG GAGTCGGCGG AGAAGTAATC GCTTACGTCT GGTGA
|
|---|
| Protein sequence | MWSDPIADML TRIRNANMVF KEYTDIPASN LKKKICEILK REGFIADYKY IEDGKQGILR
VYLKYKGGRK NRERVIHGIV RVSHSGRRIY VDKDHIPKVK NGLGIAILTT SKGVLTDKEA
RQLGVGGEVI AYVW
|
|---|
| |