Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1366 |
Symbol | |
ID | 6092808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1391157 |
End bp | 1392167 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642488568 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001739393 |
Protein GI | 170289155 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00249264 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGT TTGTGATACC GAAAAAATTA AAGGTGGAGG AAGAACGAGA GGAAAAGGAC TATTATTATG CAAGATTTTC GCTTTCTCCG CTTGAAAGAG GATATGCCAT CACGATAGGA AACGCATTGA GGAGAGTTCT TCTCTCCTCC ATACCTTCTC TCGCAATCGT TGGAGTGAGA TTCATAAAGC CAGAAAAGTA CCATGAATAC GATTACATTG AAGGAGTAAA AGAAGACATA CTGGATATAA TCCTGAACTT GAAGAAAGTT CAGTTTCGGG TCAACGTGAC TGTGAAAGGT ACAATAAAGA TGGAGGTAGA AAAGAAGGGA CCGGGCGAAC TTGTCGCGGG TGATATAAAG ACACCGGCTG GTATCGAAGT GGCGAATCCG GATCTACACA TCGCCACCTT GAATTCTAAA GCAGATCTTT TCTTCGAAGT CTACGCAGAA GTGGGAAAGG GATTCGTTCC CGTGTCTGAG AGGGAAGAAA GACCTGACGT GGGATGGATT CCAATAGATG GAGTTTTCAG CCCTGTGATC AAAGTGAACT TTCTGACGGA AAACGTTCGT GTTGGAAAGA GGACGGATTA CGACAAGCTC ATTCTTGAAA TCTGGACGAA GAAATCGATA AGACCTGAAG AGGCCCTCAG AAAGGCTGCG GACATCCTGA TAAATCATTT CAAAATCGTG ACGGAGGGTC TGCCTGAACT GAAGATCTCC GAGGAATACA TCATCACATC CGAGGAAGAA GAAGCAGAAA TTCCCGCCGT TGATCATGAA GAAGAAAACA GGGAGAATCT GGATGTTTAC AACAGAAAGA TAGATGAACT CGAGCTTTCG GTCAGATCTC TCAACTGTTT GAAGAGAGCT AAAATAGAAA CGATCGGAGA TCTTCTCAGC AAAACAGAGG AAGAGCTTTT GAAGATAAAG AATTTTGGTC AGAAATCTCT CGATGAGGTC AAGGAGAAAT TGAAAGAAAA ATTCGGTCTT GAGCTCAGGA AGGGGGAATG A
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Protein sequence | MIEFVIPKKL KVEEEREEKD YYYARFSLSP LERGYAITIG NALRRVLLSS IPSLAIVGVR FIKPEKYHEY DYIEGVKEDI LDIILNLKKV QFRVNVTVKG TIKMEVEKKG PGELVAGDIK TPAGIEVANP DLHIATLNSK ADLFFEVYAE VGKGFVPVSE REERPDVGWI PIDGVFSPVI KVNFLTENVR VGKRTDYDKL ILEIWTKKSI RPEEALRKAA DILINHFKIV TEGLPELKIS EEYIITSEEE EAEIPAVDHE EENRENLDVY NRKIDELELS VRSLNCLKRA KIETIGDLLS KTEEELLKIK NFGQKSLDEV KEKLKEKFGL ELRKGE
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