| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1342 |
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| Symbol | |
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| ID | 6092784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1372388 |
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| End bp | 1375069 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642488544 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001739369 |
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| Protein GI | 170289131 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0160807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGAGA TTCTTCTGCT GCCGAACGAA AGATTTTCGA ATATAGAAGG ATACATTTTC
TATCCTTCGA GAGATGTTTT GCCTCTCGAA GATGTTGTTT TGTCACCCGA GATAAAAGGA
AAAAGAATAG AAATCCTGTG GAGGCTTCTA AACGGAGAGA ACATCAAGAT AGCCACTACC
CTGAAAGCGC TCACCGAAAA GGTGTTCTCA CCCGATTTTC TGAGAGAAAA CTCCCTGATG
ATAACAAGAT CCACAAAGCT CACATTGTCC CCAGAAAGAC TCGTCGAAAT GGGATATGAA
CGTGTTTTCA CTGTTCAGAA CGTGGGAGAA TTTGCCATTC GCGGAGATAT AATCGACATT
TACTCTCCAG GGAACGACTT TCCTGTGAGG ATAGAGCTGT TCGGGGACGA AATCGAAGAA
ATCCGTTTCT TCAAGGTAGA CACCCAGCGT TCATTTCAGA GTGCTGACAA GACTCTGATA
CTTCCTTTTG TTGATTTATA CGGTGAAAGC ACCTTGCTTG ATTTCGTAAA AACGGATGTT
CGCTTCATCT GCGAAGATCT TCAAAAGGTT CTGGATGAAT ACAGAAAGTT CAGGAAAGAA
ATGAGGGACC TTTTGAAGGA ACGCTACAAC GACTTCTTCG ATGAAAGAGT AGTCGAAGTG
GTACTCAAAA ACGTTGAAAA AGCTTCCGTA TCGTTATCAA CACGTATTGA GAAGAAAGAA
TCGCTGCCCA TTCTGGATGT CGATGAGATC GAAGAGGGTG GACTCGTAGT TCACAGAGAA
CACGGAATAG CGATTTTCGA AGGGGTTGTT CGGCTCAAGG GAGTTCTCGG AGAGAGGGAT
TATTTGAAGT TGAAATATGA AGACGCAGTT TTGTACGTTC CCATCGAGAA GATCGACAGA
GTTCATAAAT ACATAGGTGA TCCTTCGCAG GTCAAACTCG ACCGGATGAA CCGCGGAAAA
TGGAAACAAA CACTGAAGAA AGTGAGAGAA GACATCGAGA AAAAGATCAG AGAACTCGTT
GAACTTTACA TGAAAAGACA GGAGGCCCAG GGTCTTTCTC TTCCAGGTGA CCCAGAACTG
GAAGAAAAAT TCGCGGAATC TTTTCCATAC ATTGAAACCC CCGATCAGCA ACAGAGTATA
GAGGAAGTGA TGAGTGATCT TGCCTCTGAA AAACCAATGG ACAGACTCCT GTGCGGAGAT
GCGGGTGTTG GAAAAACAGA AGTGGCTCTG CGAGCTGCGT TCCGTGCAGT TGTATCTGGT
AAACAGGTAG CGGTGCTTGT ACCAACCACC GTTCTGGCAA GACAACACTA CGAGAACTTC
AAAGAGAGAA TGGAAACGTT CGGTGTAAAA GTAGAACTCC TGGACAGTTC AAGAACAGCG
AGAGAAAAGA AGGAGATCAT CGAAAAGCTG AAGAAGGGAG AAATAGACAT CATCATAGGC
ACGCATTCTT TGCTGAATGA AAGAATCGAA TTCTCCGATC TTGGTCTTGT CATCATCGAC
GAAGAACAAA AGTTTGGAGT TGAGCAAAAA GAAAGGTTCA AGAAACTGAG ACTCTCGGTG
AACGTGCTAA CCCTGAGTGC TACACCTATT CCACGCACCC TCCACATGGC CCTCTCTGGA
ATGAAAGATT TTTCTGTGAT AAATTCTCCT CCCCCTGGAA GAAAACCAGT ATACGTTTAT
GTCGCAGAGT ACAGCGATGA TCTCGTCAAG GGAGCGGTGA TCAGGGAGAT AAACAGGGGA
GGTCAGGTGA TCTACGTTCA CAACCGCGTG GAAGAACTAC CGGAAGTTTT CGAAAAACTG
AAAAGGATGT TCCCAGAGCT GGAAATAGCA GTCGCCCACG GAAAGATGTC TAGAAGAGCT
ATGGAGAGAA TTGTCCACGA GTTCTACCGC GGGAACATCG ATGTTCTTCT GTGTACCACA
ATTATCGAGA ATGGTGTTGA TATACCGAAT GCAAACACAC TCATAGTGGA TGACGCACAC
AGATACGGCC TTTCACAGCT TTATCAGCTC AGAGGAAGGG TGGGTAGAAG CGACCGAAGG
GCCTTTGCGT ACTTCCTGTA CCCAAAGGGT ACTCCAAGAA GCGCTCTTGA AAGACTGAAG
GTGCTAAAAT CCTACACAGG CTTTGGAAGC GGTCTTCAAA TAGCGTTGAA AGATATGGAA
CTGAGAGGTG TGGGAGATGT CCTCGGTTTG GAACAGCATG GAAATGTTGT GTCCGTTGGT
TTGAAACTGT ACAACGAAAT CTTGAAAGAG ACCATCACGA GATTCAAAGA AAGACGAATC
GAAAAGAAAC ACTCTGTGAA CGTTGAAATA GAAAATCCCC CGGGCAGATT TTTCATACCG
GAAGATTACG TGCAGAATCC TGTAGAGAGG TTGAGACTTT ACAGAAGGCT CGCATCCTCT
CTTGATGAGG AAGATCTTGA GGAAATACTG GAGGAAATGA GGGATAGATT CGGAGAACCA
CCCGAAGAAG TGAAGTTACT CGTTGATTAC TTCAGATTGA GGATCAGAGC TTCGAAGCTG
GGAGTAAAGA AGATCAGATT CGATCACTCA ATGGTGGAAA TCTTTCCAAA CAGAGACTCG
CCGTTTTTGA ATCATCCGAG ATACAATAGA CGGTCGGGAA GTGTTGTTCT CTACACCAGG
GAGAATCCGG TGGAGTTTCT CATGGACTTA CTGAAAAAAT GA
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| Protein sequence | MVEILLLPNE RFSNIEGYIF YPSRDVLPLE DVVLSPEIKG KRIEILWRLL NGENIKIATT
LKALTEKVFS PDFLRENSLM ITRSTKLTLS PERLVEMGYE RVFTVQNVGE FAIRGDIIDI
YSPGNDFPVR IELFGDEIEE IRFFKVDTQR SFQSADKTLI LPFVDLYGES TLLDFVKTDV
RFICEDLQKV LDEYRKFRKE MRDLLKERYN DFFDERVVEV VLKNVEKASV SLSTRIEKKE
SLPILDVDEI EEGGLVVHRE HGIAIFEGVV RLKGVLGERD YLKLKYEDAV LYVPIEKIDR
VHKYIGDPSQ VKLDRMNRGK WKQTLKKVRE DIEKKIRELV ELYMKRQEAQ GLSLPGDPEL
EEKFAESFPY IETPDQQQSI EEVMSDLASE KPMDRLLCGD AGVGKTEVAL RAAFRAVVSG
KQVAVLVPTT VLARQHYENF KERMETFGVK VELLDSSRTA REKKEIIEKL KKGEIDIIIG
THSLLNERIE FSDLGLVIID EEQKFGVEQK ERFKKLRLSV NVLTLSATPI PRTLHMALSG
MKDFSVINSP PPGRKPVYVY VAEYSDDLVK GAVIREINRG GQVIYVHNRV EELPEVFEKL
KRMFPELEIA VAHGKMSRRA MERIVHEFYR GNIDVLLCTT IIENGVDIPN ANTLIVDDAH
RYGLSQLYQL RGRVGRSDRR AFAYFLYPKG TPRSALERLK VLKSYTGFGS GLQIALKDME
LRGVGDVLGL EQHGNVVSVG LKLYNEILKE TITRFKERRI EKKHSVNVEI ENPPGRFFIP
EDYVQNPVER LRLYRRLASS LDEEDLEEIL EEMRDRFGEP PEEVKLLVDY FRLRIRASKL
GVKKIRFDHS MVEIFPNRDS PFLNHPRYNR RSGSVVLYTR ENPVEFLMDL LKK
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