Gene TRQ2_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1320 
Symbol 
ID6092762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp1350781 
End bp1351392 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID642488522 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001739347 
Protein GI170289109 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0469886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAGA TGATACATCT TCCAAGATCT ACCTTTGAAA GGTTGAAGAT GTACCGAAAA 
GTTCTGGAAG CGACAAAAAA ACCTTACATC TCCTCTGATG AGATCGCAAG ATTCCTCGAA 
ATAAACCCGG ACCTCGTGAG GAAAGACTTT TCCTATCTCA AATGTCAGGG AAAGCCCAGG 
GTCGGCTACG ATGTGGAAGA ACTCAGAAAA GAACTCGACG ATCTCTTCGG AGTGAACAAC 
ACCACTAACA TGATCATCGT TGGAGCAAAT GACCTCGCAA GGGCTTTGTT GAGCCTGGAC 
TTTTCGAAAG CCGGTGTGAA AGTCGTAGCC GTGTTCGATA CAGAGAAGGA AAACGTGGGA 
AAGTTCATAG GAGAATTCGC TGTCAGAGAA CTGGACGTTC TGGAAAGAGT CATCAGAAGG 
TTCGATGCGG AGATAGCCGC ACTGTGCGTG TCAAAGGACA GAGCGCAGGC TACAGCCAGA 
TTTCTCATCG AAAAGGGAAT AAAAGCCGTA TGGAACTTCA CGGGAGTTCA TCTTGAACTT 
CCTTCAAACG TCATTGTCGT GGACGAAGAC CTCACAAAAT CCCTCCTGAC GATAAAACAC 
CTTCTGAAGT AA
 
Protein sequence
MAEMIHLPRS TFERLKMYRK VLEATKKPYI SSDEIARFLE INPDLVRKDF SYLKCQGKPR 
VGYDVEELRK ELDDLFGVNN TTNMIIVGAN DLARALLSLD FSKAGVKVVA VFDTEKENVG 
KFIGEFAVRE LDVLERVIRR FDAEIAALCV SKDRAQATAR FLIEKGIKAV WNFTGVHLEL 
PSNVIVVDED LTKSLLTIKH LLK