Gene TRQ2_1318 details

Gene Information

• Locus tag: TRQ2_1318
• ID: 6092760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 1346957
• End bp: 1348837
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642488520
• Product: NADH dehydrogenase (quinone)
• Protein accession: YP_001739345
• Protein GI: 170289107
• COG category: [C] Energy production and conversion
• COG ID: [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; [COG3411] Ferredoxin

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAGA ACGCGAAAGA GTTCGTCCAG TACGCAAACA AACTGAAAAC CCTGAGAGAG 
AAAAAACTGA ACGGTGTCTC TATATACGTC TGCGTCGGAA CTGGTTGTAC TGCGAAAGGT 
GCTCTCAAAG TTTACAGCGC TTTCGAAGAA GAGCTCAAAA AGAGAAACCT CCTCGGACAG 
GTCACGCTGG AAAAGATCGA TGATGACAAA GTCACGTTGA ACAGAACAGG GTGCTGTGGA 
AGGTGTTCTT CCGGTCCCCT CGTGAAGATC ATGCCCTACA GGTTCTTCTA TTCAAATGTT 
GTACCCGAAG ATGTCCCGGA GATCGTGGAC AGAACCGTCC TCAAGGGTGA GCCCATAGAA 
AGACTCTTTC TGACGGATCC CCTCACGGGA GAAAAGGTTC CCAGAATAGA GGACACCACG 
CTTTTCAAAA ACCAGGATTT CTACATCATG GAAGCCATAG GTGAGTCCGA GTGTGACAGT 
ATAGAAGACT ACATCGCACG GGGTGGATAC GAGTCTCTCG TCAAAGCCCT CACTTCAATG 
ACACCGGAAG AAATCATAGA AACGGTGAAG GCATCCGGTC TCAGAGGAAG AGGTGGAGGA 
GGATTTCCAA CAGGTCTCAA ATGGGAATTC ACCAGAAAAG CGCAGGGTGA TATAAAATTC 
GTCGTGTGCA ACGGAGACGA AGGAGATCCG GGAGCGTTCA TGAACAGGAC TCTCCTGAAG 
AGGGATCCAC ACCTTGTTCT GGAAGGGATG ATCATAGCCG GGTATGCGGT CGGCGCACAG 
AAGGGGTACG CTTACATCAG AGCCGAATAC CCGTTCGCAG TCAGGATGTT CAAAAAGGCC 
ATAGAAGATG CAAAGAAAAT GGGACTTCTC GGTGAAAACA TCCTCGGAAC AGGCTTTTCC 
TTCGACGTGG AAGTGAAAGA GGGAGCCGGT GCGTTCGTGT GCGGCGAAGA GACGGCACTT 
CTTGCCTCCA TCGAAGGGAA AAGAGGTATG CCCAGACCAA AGCCACCGTT CCCGGCTCAA 
TCCGGTCTCT GGGGTAAACC CACCCTCATA AACAACGTGG AAACATACGC GAACATACCA 
AGAATACTCA GAGACGGTGT GGAAAACTAC AGAAAACGCG GAACGGAAAA CTCACCGGGA 
ACCAAGATGT TCTCCGTTGC AGGCCCCCTG AAAGCCACTG GTATCATCGA AGTTGAATTC 
GGCACCACCT TGAGAGATAT CATCTACAAC ATATGTGGAG GATTCGTTGA AGGAGAAGAG 
TTCAAAGCGG TTCAGATTGG AGGACCGTCC GGAGCGTGTC TTTCCGAAGA TTTCATCGAC 
ATGCCCCTCG ATTACGACAC ACTGAAGAAA GCTGATGCGA TGGTAGGATC CGGTGGAATA 
GTCGTGATTA CAAAGAAAAC GTGTATGGTA GAGGTTGCAA GGTTCTTCCT CGATTTCACC 
AAGAGGGAAT CCTGTGGAAA GTGCGTGCCG TGCAGGGAAG GCACCATGCA GGCGTACAAC 
ATATTGGAAA AGTTCACCCA CGGAAAAGCT ACATACGAGG ATCTCAAAGC TCTCGAACAC 
CTCTCAAAAA CAATAAAGAC CGCTTCTCTC TGTGGGCTCG GAAAGACCGC TCCCAACCCC 
ATTCTCAGTA CCCTGAAGCT CTTCAGAGAG GAGTACATTG CACACATCGA AGGAGAATGT 
CCAAGCGGAA TGTGTACGGC GTTCAAGAAA TACGTCATCA ACCCGGATAT CTGTAAAGGC 
TGTGGACTCT GTGCCAGATC CTGTCCACAG AACGCCATAA CCGGAGAAAG AGGAAAACCG 
TACACGATAA ATCAGGAGAA GTGTGTCAAG TGCGGTCTCT GTGCGAGTAA ATGTCCGTTC 
AAAGCCATAG AGCTTGTCTG A 

 

Protein sequence

MFKNAKEFVQ YANKLKTLRE KKLNGVSIYV CVGTGCTAKG ALKVYSAFEE ELKKRNLLGQ 
VTLEKIDDDK VTLNRTGCCG RCSSGPLVKI MPYRFFYSNV VPEDVPEIVD RTVLKGEPIE 
RLFLTDPLTG EKVPRIEDTT LFKNQDFYIM EAIGESECDS IEDYIARGGY ESLVKALTSM 
TPEEIIETVK ASGLRGRGGG GFPTGLKWEF TRKAQGDIKF VVCNGDEGDP GAFMNRTLLK 
RDPHLVLEGM IIAGYAVGAQ KGYAYIRAEY PFAVRMFKKA IEDAKKMGLL GENILGTGFS 
FDVEVKEGAG AFVCGEETAL LASIEGKRGM PRPKPPFPAQ SGLWGKPTLI NNVETYANIP 
RILRDGVENY RKRGTENSPG TKMFSVAGPL KATGIIEVEF GTTLRDIIYN ICGGFVEGEE 
FKAVQIGGPS GACLSEDFID MPLDYDTLKK ADAMVGSGGI VVITKKTCMV EVARFFLDFT 
KRESCGKCVP CREGTMQAYN ILEKFTHGKA TYEDLKALEH LSKTIKTASL CGLGKTAPNP 
ILSTLKLFRE EYIAHIEGEC PSGMCTAFKK YVINPDICKG CGLCARSCPQ NAITGERGKP 
YTINQEKCVK CGLCASKCPF KAIELV