Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1300 |
Symbol | |
ID | 6092741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1327467 |
End bp | 1330025 |
Gene Length | 2559 bp |
Protein Length | 852 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642488501 |
Product | SMC domain-containing protein |
Protein accession | YP_001739327 |
Protein GI | 170289089 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.975813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGGCCTG AAAGACTCAC CGTTAGAAAC TTTCTTGGGC TGAAAAATGT CGATATAGAG TTCCAGAGCG GAATAACGGT TGTAGAGGGT CCGAACGGTG CCGGAAAGTC GTCCCTCTTC GAAGCCATTT CTTTTGCACT TTTCGGGAAC GGGATAAGGT ATCCCAACTC GTACGATTAC GTGAACAAGA ACGCCACCGA TGGAACTGCC CGTCTCGTGT TTCAATTCGA ACGTGGAGGG AAAAGATACG AAATCATAAG AGAGATAAAT GCCCTGCAGA GAAAACACAA CGCGAAGCTC TCCGAGATAC TGGAAAACGG AAAGAAAGCG GCCATAGCAG CAAAACCTGC CAGCGTTAAG CAGGAAGTGG AAAAAATTCT GGGAATAGAA CACAGAACCT TCATAAGAAC GGTTTTCCTC CCACAGGGAG AAATAGACAA GCTTTTGACT TCTCCTCCAT CGGAGATCAC CGAGATCATC TCCGATGTTT TCCAAAGCAA AGAAACACTC GAAAAGCTGG AAAAACTCCT CAAAGAGAAG ATGAAAAAGT TGGAGAACGA GATATCCTCC CTGCAAGCTC TCTACGCCGC CAGCTGGAAG TATCTGGAAG AGAACGATCT GGAAGTTCTG AAGAGCGAGC TGAAAACCGT CTCGGAGAAA AAGAAAGAAC TTCTCAAAAA AAGAGAAGAA CTCCAGAAGG AAGAAGAGCA GCTCAAGAGG CTCCTTGAAA AATATCGGGA ACTCGTGAAA AAGAAAGAGA GGCTCAAGGC GCTCTCTCTG AGAAAGAACG AATTGCAAAA AGAAGTGGTC CACGAGCAGA AGGTGAAAAA AGCGAAGGAA CTGGAACCGC TCTTTCGAGA ACTCTACCTC AGACAGAGGG AATTTGAGAG GCTCTCACAG GATTTGAACA GCAGGGAAGA GAGATACAAA GAACTCGAAA AGAAAAAGGA AGCGATCTCA AAAGAAATCC CTGTTCACAG GGAAAGACTT TCCAAGCTGG AGGAGATGGC AGAAAATCTT AACGAAGAAC TGGATCTTCT TGAAAAGGTC TTGAAGGTCT CTCGGCCGTT TCTTGAGCAA AGAATAAGAT TGAAAGAAAA TCTCACGAGG CTCGAGGAAG AGATCAGAAG ACTCGTTGGA GAAAAAGAAA AGAGAGAAAA AGAATTGCTT TCGATTGAAA AGACAGAGAA TGAAACGAAG GATGAGCTGG AAAAACTGCT CGGTGAACTC TCAGTTTTGA AGAAAGACCA CATGAAATGG CTGGCCTATC AGATAGCTTC CAGTCTGAAC GAAGGTGACA CCTGCCCTGT ATGCGGTGGA GTGTTCCATG GAAAAATGGA AGCCGTCGAA TTCAATGTCG ATGAATTCGA GAAGCTCGAT CAAAAAAGAA GCGAACTGGA AAACACCTTG AACGTTCTGA AAGAGAGAAA GAAAAGCCTT TCCAGCCTCA TAGAAGATCT TCTGATGAAA ACCGAAGAGG GGAAGAAAAA TCTGAAGAGC ATTCGAAATC AGATTGAAAA AATTGAAGAA GAACTGCACA GATTGGGTTA TTCGGAAGAT CTGGAGGAAA AACTGGATGA AAAAAGAAAA AAGCTTAGAA AAATAGAAGA AGAGAGGCAT TCTATTTCCC AGAAGATCAC AGCGGCCGAC GTTCAGATTT CGCAGATCGA AAACCAGCTG AAAGAAATAA AAGGAGAGAT CGAAGCCAAA AGGGAAACTC TGAAAGAACA GCGCGAAGAG ATGGACCAGT TGAAAAGAGA TTTCTTCGAT CGTTTAGGGG AGATAGGAAT CGGCTTTGAA GAGTTCAGGA TCCTCGTCAA AGAGGAAGTA AAGGACGCGG AAAAAGAATT GGGAATTGTA GAGACGGAGA TCAGGCTTCT TGAGGGAAGC CTAAAGGAGC TCGAATCAGA GAATGTTCGA GATGTGAGTG AAGATTACGA AAGGGTTCGA AATCAACTGG AAGCTCTCTC ACAGGAAATA TCGGATCTTG AGAGAAAAGA AGGACGGCTC AATCATCTCA TCGAAGAAAC ACTCAGAAGA GAGCGAGAGT TGAAGAGTCT GGAGAAGAAG CTGAAAGAGC TGAGCGATGA ATACAACAAT CTGGATCTTC TGAGGAAGTA TCTGTTCGAT AAAAGTAACT TCTCAAGATA CTTCACAGGG AGAGTTCTCG AAGCGGTCCT GAAAAGAACG AAGGCATATC TCGACATTCT GACGAACGGA AGGTTCGACA TAGATTTTGA CGACGAAAAA GGTGGTTTCA TCATAAAAGA TTGGGGCATC GAAAGACCAG CGAGGGGACT TTCCGGTGGA GAAAGAGCTC TCATTTCCAT ATCTCTTGCC ATGTCCCTTG CAGAGGTAGC CTCCGGCAGG CTGGACGCGT TCTTCATCGA TGAAGGATTT TCCAGTCTCG ACACGGAGAA CAAAGAGAAG ATCGCTTCCG TTCTGAAGGA ACTCGAAAGA TTGAACAAGG TGATCGTTTT CATCACGCAC GACAAGGAGT TCTCGGAGGC TTTCGACAGG AAACTGAGAA TAATGGGAGG AGTTGTGGTG AATGAGTGA
|
Protein sequence | MRPERLTVRN FLGLKNVDIE FQSGITVVEG PNGAGKSSLF EAISFALFGN GIRYPNSYDY VNKNATDGTA RLVFQFERGG KRYEIIREIN ALQRKHNAKL SEILENGKKA AIAAKPASVK QEVEKILGIE HRTFIRTVFL PQGEIDKLLT SPPSEITEII SDVFQSKETL EKLEKLLKEK MKKLENEISS LQALYAASWK YLEENDLEVL KSELKTVSEK KKELLKKREE LQKEEEQLKR LLEKYRELVK KKERLKALSL RKNELQKEVV HEQKVKKAKE LEPLFRELYL RQREFERLSQ DLNSREERYK ELEKKKEAIS KEIPVHRERL SKLEEMAENL NEELDLLEKV LKVSRPFLEQ RIRLKENLTR LEEEIRRLVG EKEKREKELL SIEKTENETK DELEKLLGEL SVLKKDHMKW LAYQIASSLN EGDTCPVCGG VFHGKMEAVE FNVDEFEKLD QKRSELENTL NVLKERKKSL SSLIEDLLMK TEEGKKNLKS IRNQIEKIEE ELHRLGYSED LEEKLDEKRK KLRKIEEERH SISQKITAAD VQISQIENQL KEIKGEIEAK RETLKEQREE MDQLKRDFFD RLGEIGIGFE EFRILVKEEV KDAEKELGIV ETEIRLLEGS LKELESENVR DVSEDYERVR NQLEALSQEI SDLERKEGRL NHLIEETLRR ERELKSLEKK LKELSDEYNN LDLLRKYLFD KSNFSRYFTG RVLEAVLKRT KAYLDILTNG RFDIDFDDEK GGFIIKDWGI ERPARGLSGG ERALISISLA MSLAEVASGR LDAFFIDEGF SSLDTENKEK IASVLKELER LNKVIVFITH DKEFSEAFDR KLRIMGGVVV NE
|
| |