Gene TRQ2_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1300 
Symbol 
ID6092741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1327467 
End bp1330025 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content45% 
IMG OID642488501 
ProductSMC domain-containing protein 
Protein accessionYP_001739327 
Protein GI170289089 
COG category[L] Replication, recombination and repair 
COG ID[COG0419] ATPase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.975813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCCTG AAAGACTCAC CGTTAGAAAC TTTCTTGGGC TGAAAAATGT CGATATAGAG 
TTCCAGAGCG GAATAACGGT TGTAGAGGGT CCGAACGGTG CCGGAAAGTC GTCCCTCTTC
GAAGCCATTT CTTTTGCACT TTTCGGGAAC GGGATAAGGT ATCCCAACTC GTACGATTAC
GTGAACAAGA ACGCCACCGA TGGAACTGCC CGTCTCGTGT TTCAATTCGA ACGTGGAGGG
AAAAGATACG AAATCATAAG AGAGATAAAT GCCCTGCAGA GAAAACACAA CGCGAAGCTC
TCCGAGATAC TGGAAAACGG AAAGAAAGCG GCCATAGCAG CAAAACCTGC CAGCGTTAAG
CAGGAAGTGG AAAAAATTCT GGGAATAGAA CACAGAACCT TCATAAGAAC GGTTTTCCTC
CCACAGGGAG AAATAGACAA GCTTTTGACT TCTCCTCCAT CGGAGATCAC CGAGATCATC
TCCGATGTTT TCCAAAGCAA AGAAACACTC GAAAAGCTGG AAAAACTCCT CAAAGAGAAG
ATGAAAAAGT TGGAGAACGA GATATCCTCC CTGCAAGCTC TCTACGCCGC CAGCTGGAAG
TATCTGGAAG AGAACGATCT GGAAGTTCTG AAGAGCGAGC TGAAAACCGT CTCGGAGAAA
AAGAAAGAAC TTCTCAAAAA AAGAGAAGAA CTCCAGAAGG AAGAAGAGCA GCTCAAGAGG
CTCCTTGAAA AATATCGGGA ACTCGTGAAA AAGAAAGAGA GGCTCAAGGC GCTCTCTCTG
AGAAAGAACG AATTGCAAAA AGAAGTGGTC CACGAGCAGA AGGTGAAAAA AGCGAAGGAA
CTGGAACCGC TCTTTCGAGA ACTCTACCTC AGACAGAGGG AATTTGAGAG GCTCTCACAG
GATTTGAACA GCAGGGAAGA GAGATACAAA GAACTCGAAA AGAAAAAGGA AGCGATCTCA
AAAGAAATCC CTGTTCACAG GGAAAGACTT TCCAAGCTGG AGGAGATGGC AGAAAATCTT
AACGAAGAAC TGGATCTTCT TGAAAAGGTC TTGAAGGTCT CTCGGCCGTT TCTTGAGCAA
AGAATAAGAT TGAAAGAAAA TCTCACGAGG CTCGAGGAAG AGATCAGAAG ACTCGTTGGA
GAAAAAGAAA AGAGAGAAAA AGAATTGCTT TCGATTGAAA AGACAGAGAA TGAAACGAAG
GATGAGCTGG AAAAACTGCT CGGTGAACTC TCAGTTTTGA AGAAAGACCA CATGAAATGG
CTGGCCTATC AGATAGCTTC CAGTCTGAAC GAAGGTGACA CCTGCCCTGT ATGCGGTGGA
GTGTTCCATG GAAAAATGGA AGCCGTCGAA TTCAATGTCG ATGAATTCGA GAAGCTCGAT
CAAAAAAGAA GCGAACTGGA AAACACCTTG AACGTTCTGA AAGAGAGAAA GAAAAGCCTT
TCCAGCCTCA TAGAAGATCT TCTGATGAAA ACCGAAGAGG GGAAGAAAAA TCTGAAGAGC
ATTCGAAATC AGATTGAAAA AATTGAAGAA GAACTGCACA GATTGGGTTA TTCGGAAGAT
CTGGAGGAAA AACTGGATGA AAAAAGAAAA AAGCTTAGAA AAATAGAAGA AGAGAGGCAT
TCTATTTCCC AGAAGATCAC AGCGGCCGAC GTTCAGATTT CGCAGATCGA AAACCAGCTG
AAAGAAATAA AAGGAGAGAT CGAAGCCAAA AGGGAAACTC TGAAAGAACA GCGCGAAGAG
ATGGACCAGT TGAAAAGAGA TTTCTTCGAT CGTTTAGGGG AGATAGGAAT CGGCTTTGAA
GAGTTCAGGA TCCTCGTCAA AGAGGAAGTA AAGGACGCGG AAAAAGAATT GGGAATTGTA
GAGACGGAGA TCAGGCTTCT TGAGGGAAGC CTAAAGGAGC TCGAATCAGA GAATGTTCGA
GATGTGAGTG AAGATTACGA AAGGGTTCGA AATCAACTGG AAGCTCTCTC ACAGGAAATA
TCGGATCTTG AGAGAAAAGA AGGACGGCTC AATCATCTCA TCGAAGAAAC ACTCAGAAGA
GAGCGAGAGT TGAAGAGTCT GGAGAAGAAG CTGAAAGAGC TGAGCGATGA ATACAACAAT
CTGGATCTTC TGAGGAAGTA TCTGTTCGAT AAAAGTAACT TCTCAAGATA CTTCACAGGG
AGAGTTCTCG AAGCGGTCCT GAAAAGAACG AAGGCATATC TCGACATTCT GACGAACGGA
AGGTTCGACA TAGATTTTGA CGACGAAAAA GGTGGTTTCA TCATAAAAGA TTGGGGCATC
GAAAGACCAG CGAGGGGACT TTCCGGTGGA GAAAGAGCTC TCATTTCCAT ATCTCTTGCC
ATGTCCCTTG CAGAGGTAGC CTCCGGCAGG CTGGACGCGT TCTTCATCGA TGAAGGATTT
TCCAGTCTCG ACACGGAGAA CAAAGAGAAG ATCGCTTCCG TTCTGAAGGA ACTCGAAAGA
TTGAACAAGG TGATCGTTTT CATCACGCAC GACAAGGAGT TCTCGGAGGC TTTCGACAGG
AAACTGAGAA TAATGGGAGG AGTTGTGGTG AATGAGTGA
 
Protein sequence
MRPERLTVRN FLGLKNVDIE FQSGITVVEG PNGAGKSSLF EAISFALFGN GIRYPNSYDY 
VNKNATDGTA RLVFQFERGG KRYEIIREIN ALQRKHNAKL SEILENGKKA AIAAKPASVK
QEVEKILGIE HRTFIRTVFL PQGEIDKLLT SPPSEITEII SDVFQSKETL EKLEKLLKEK
MKKLENEISS LQALYAASWK YLEENDLEVL KSELKTVSEK KKELLKKREE LQKEEEQLKR
LLEKYRELVK KKERLKALSL RKNELQKEVV HEQKVKKAKE LEPLFRELYL RQREFERLSQ
DLNSREERYK ELEKKKEAIS KEIPVHRERL SKLEEMAENL NEELDLLEKV LKVSRPFLEQ
RIRLKENLTR LEEEIRRLVG EKEKREKELL SIEKTENETK DELEKLLGEL SVLKKDHMKW
LAYQIASSLN EGDTCPVCGG VFHGKMEAVE FNVDEFEKLD QKRSELENTL NVLKERKKSL
SSLIEDLLMK TEEGKKNLKS IRNQIEKIEE ELHRLGYSED LEEKLDEKRK KLRKIEEERH
SISQKITAAD VQISQIENQL KEIKGEIEAK RETLKEQREE MDQLKRDFFD RLGEIGIGFE
EFRILVKEEV KDAEKELGIV ETEIRLLEGS LKELESENVR DVSEDYERVR NQLEALSQEI
SDLERKEGRL NHLIEETLRR ERELKSLEKK LKELSDEYNN LDLLRKYLFD KSNFSRYFTG
RVLEAVLKRT KAYLDILTNG RFDIDFDDEK GGFIIKDWGI ERPARGLSGG ERALISISLA
MSLAEVASGR LDAFFIDEGF SSLDTENKEK IASVLKELER LNKVIVFITH DKEFSEAFDR
KLRIMGGVVV NE