Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1261 |
Symbol | |
ID | 6092702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1292981 |
End bp | 1293550 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642488462 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001739288 |
Protein GI | 170289050 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.782588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGAAA AAAAACTCGT TGAAGCCCTC AAAAGGAAAG AAGACTGGGC ATACGAGATT CTATACAGAG AATTCGCTCC AAAAATAGGA AGTATAGCAA AGAGCTTTTT GAACACCGAC GATGTGGATG ATGTTGTTCA GGATGTTTTT TTGAGGATTT TCAAAGGGAT AAAGAAATTC AGAGGCGATT CAAAACTCTC CACGTGGATC TACAGGATAG CCGTGAATGT CTGTAAGGAC TATCTTCAGA AGTACAAGAA GAGAAACGAG TTTTTGACGG ATTTCCAGGA GAAAGACAAC GAAGAGGAAA TCTACATCCA GCCGGAAGCG AAAGAGGATG TGTTCGATGA AGTGCTTCGA TCGATCACTG CTGAGAGGGT TCAAAAGGCT CTGGAAAAGC TTTCACCGGA GGACAGGTTG CTCATAAAAC TGAGAGATAT AGACGGGTTG AGCTATGAAG AAATAGCGTC CGTTTTGCAA AAACCTGTTG GAACTGTGAA AAGCCGTCTT CACTACGCAA GAAAGAGGCT GGGAAACTTG CTGAAAGAGG GTGGAACTGT TGAAAGATGA
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Protein sequence | MNEKKLVEAL KRKEDWAYEI LYREFAPKIG SIAKSFLNTD DVDDVVQDVF LRIFKGIKKF RGDSKLSTWI YRIAVNVCKD YLQKYKKRNE FLTDFQEKDN EEEIYIQPEA KEDVFDEVLR SITAERVQKA LEKLSPEDRL LIKLRDIDGL SYEEIASVLQ KPVGTVKSRL HYARKRLGNL LKEGGTVER
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