Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1238 |
Symbol | |
ID | 6092674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1266414 |
End bp | 1267730 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642488434 |
Product | WD-40-like repeat-containing protein |
Protein accession | YP_001739265 |
Protein GI | 170289027 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.398075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCTTG CTTTCAATTA CAGGATTGAG GAAAACGGAG TGCTTTACTT CCTCGGTGAT GCGACGCCAA CGTCGTATGA GATGGAGATC ATCGAGGAAT GGAAACGCCT TCCTGTGGTG ACCCTTGTTT ACGATGGCCC CTCTGAGTAC GAAGGCGCTG TGAGAGATTT TCTTTCCGAA GAAGGAGTAC TGACTGGTTC GGGAACACCC CTCATTGTCA AGATTCGAAC TAAGGAAAAT TACGTTGCCT TTCAGTTGAT ATTCGAAGAA AAGTCCGTGG ATAACTTTGA AAATCTCTCA ACAAAAGACA CCTTCCCGGA ACACTTCAGA AAAGCTATTA GGGAAATCTT TCCAGACTCT CAGCTTCCCG ATGAGTTTTT CCTTATCGTT TACAGAGATG GAAAGTTTGA AAGGAGCCTT CAACCGACTT CGACTTTTCC GGGAAGAAAA GCTCCCGTGG TGATAATTCC TCAGTGGAAA GAGAAACATA CTCTGGAAAT AGGAAGTTAC AGAAAGGTGG TTGACGAAGG GTTTTACCAG ATCGGTGGGA AGATGATATA CGCAGGAAGG GATATTTTCA TAGAAGACGT CCCGGGGCTC TACAGAAACA TCGATATGGT CTTTTTGGAC GGAGAAAAAG AATACATCTA TCGCGAAGGA TTTCTTATGA TGGGAGAAAA AACTCTAAAG GTCGAAGAGC CTGTTGATGT GGTTGATGGA ATAGTGATTA CCAGTCACAG GATGGGAAGT AAAGAGATCG ATGATACAAT TCTGTTCAGG TGGGACAATT TTGTTTTAAC GGCATCGGGG TCCCTTGTGG ATATAAGAGG AAAATGGTCG TGGAAAGTTT CAAATACACC GGTAGAGTTT TCCTTTCAGG GTGATGTTTT CTACGTACTC GATGTGTGCG GTTTCTTGAG AAGTTACAAT CTCAAAACAA GACGGCTTCT CTGGGAGAAG AAATTCGAAG GAGCCTGGGG ACTGGATTCT TCTAAGGATC GGGTTTTCCT GGGTGCTGGA GACGAAGTAC TCGTTTTGAA CGCGCAGGAC GGAGAAACGA TCGAAAGAAT GGTAGCAGAT GATTTCGCGG TATGGAAAGG GGAATTGCTC GTTTACAAAG ACGGAAGGAT AGATGGGGAG GATATGGAAG GGTTCTTCAT CAGAAACTTT GGGATGCCTC TCTTTGTTTC GGGAAAGCGA GTTGTGATAT TTGGTACGGA AAAAAAGGAG TTCGAAGAAG TTGAGAAAGT ACGTCTTTTT GAGTGGGGAA CTGTGATAAA GGTGGGAAAT GAAGTATGGC TGATAAGAAG AGATTAG
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Protein sequence | MILAFNYRIE ENGVLYFLGD ATPTSYEMEI IEEWKRLPVV TLVYDGPSEY EGAVRDFLSE EGVLTGSGTP LIVKIRTKEN YVAFQLIFEE KSVDNFENLS TKDTFPEHFR KAIREIFPDS QLPDEFFLIV YRDGKFERSL QPTSTFPGRK APVVIIPQWK EKHTLEIGSY RKVVDEGFYQ IGGKMIYAGR DIFIEDVPGL YRNIDMVFLD GEKEYIYREG FLMMGEKTLK VEEPVDVVDG IVITSHRMGS KEIDDTILFR WDNFVLTASG SLVDIRGKWS WKVSNTPVEF SFQGDVFYVL DVCGFLRSYN LKTRRLLWEK KFEGAWGLDS SKDRVFLGAG DEVLVLNAQD GETIERMVAD DFAVWKGELL VYKDGRIDGE DMEGFFIRNF GMPLFVSGKR VVIFGTEKKE FEEVEKVRLF EWGTVIKVGN EVWLIRRD
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