Gene TRQ2_1187 details

Gene Information

• Locus tag: TRQ2_1187
• ID: 6092622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga sp. RQ2
• Kingdom: Bacteria
• Replicon accession: NC_010483
• Strand: +
• Start bp: 1224465
• End bp: 1225241
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 642488382
• Product: glycoside hydrolase family protein
• Protein accession: YP_001739214
• Protein GI: 170288976

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.422064
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGTAC TGATGACAAA ACCGGGAACA TCGGATTTTG TATGGAATGG CATTCCCCTT 
TCCATGGAGC TGAATCTGTG GAACATAAAG GAATACTCCG GTTCTGTAGC TATGAAATTC 
GACGGTGAAA AGATAACTTT CGATGCGGAC ATTCAGAATC TTTCTCCGAA AGAACCGGAA 
AGGTATGTTC TCGGTTATCC CGAGTTTTAT TACGGTTACA AACCATGGGA AAATCACACA 
GCAGAAGGTT CGAAACTTCC GGTACCAGTT TCTTCTATGA AATCATTTTC CGTCGAAGTT 
TCTTTCGATA TTCACCACGA ACCGTTTCTG CCTTTGAACT TTGCCATGGA AACATGGCTC 
ACAAGAGAAA AGTACCAGAC GGAAGCATCG ATCGGCGATG TTGAAATCAT GGTCTGGTTC 
TATTTCAACA ATCTCACACC CGGAGGCGAA AAGATAGAAG AGTTCACGAT CCCGTTCGTG 
CTGAACGGAG AGAGTGTCGA AGGCACCTGG GAACTGTGGC ACGCGGAGTG GGGATGGGAC 
TACCTCGCTT TCCGCTTGAA GGATCCCGTG AAGAAGGGAA GGGTGAAGTT CGATGTAAGG 
CATTTTCTCG ATGCCGCCGG AAAAGCTCTT TCGAGTTCTG CTCGAGTGAA AGATTTTGAA 
GATCTTTACT TCACTGTCTG GGAAATCGGA ACAGAGTTTG GAAGTCCGGA GACAAAAAGT 
GCGCAGTTCG GGTGGAAGTT TGAAAATTTC TCTATTGATC TGGAGGTGAG AGAATGA 

 

Protein sequence

MVVLMTKPGT SDFVWNGIPL SMELNLWNIK EYSGSVAMKF DGEKITFDAD IQNLSPKEPE 
RYVLGYPEFY YGYKPWENHT AEGSKLPVPV SSMKSFSVEV SFDIHHEPFL PLNFAMETWL 
TREKYQTEAS IGDVEIMVWF YFNNLTPGGE KIEEFTIPFV LNGESVEGTW ELWHAEWGWD 
YLAFRLKDPV KKGRVKFDVR HFLDAAGKAL SSSARVKDFE DLYFTVWEIG TEFGSPETKS 
AQFGWKFENF SIDLEVRE