Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1162 |
Symbol | |
ID | 6092597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1200525 |
End bp | 1201859 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642488357 |
Product | xylose isomerase |
Protein accession | YP_001739189 |
Protein GI | 170288951 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000276678 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT TTTTCCCAGA AATCCCAAAG ATTCAGTTTG AAGGTAAGGA AAGCACGAAT CCGCTGGCGT TCAAGTTCTA CGATCCGAAC GAGGTGATCG ATGGAAAGCC TCTCAAGGAT CACCTGAAGT TTTCCGTCGC CTTCTGGCAC ACCTTCGTGA ACGAGGGAAG AGATCCGTTT GGAGATCCAA CCGCTGAACG CCCATGGAAC AGGTTCTCCG ATCCCATGGA CAAAGCTTTT GCGAGGGTGG ACGCTCTCTT CGAGTTCTGC GAAAAGCTCA ACATCGAGTA CTTCTGTTTC CACGACAGAG ACATCGCTCC CGAAGGAAAA ACGCTCAGAG AGACAAACAA GATACTGGAC AAAGTGGTGG AAAGAATAAA GGAAAGAATG AAGGACAGCA ACGTGAAACT CCTCTGGGGA ACGGCGAATC TGTTCTCCCA TCCGAGGTAC ATGCACGGCG CCGCGACGAC CTGCAGTGCG GATGTCTTTG CCTACGCGGC AGCCCAGGTG AAGAAAGCCC TCGAGATCAC AAAAGAACTA GGAGGAGAAG GCTACGTCTT CTGGGGTGGA AGAGAAGGCT ATGAGACACT CCTAAACACA GATCTCGGGC TGGAACTCGA AAATCTCGCG AGATTTCTCA GAATGGCAGT AGAGTACGCA AAGAAGATCG GCTTCACCGG ACAGTTCCTC ATAGAACCCA AGCCGAAAGA ACCCACCAAG CACCAGTACG ATTTCGATGT GGCAACGGCC TACGCTTTCC TGAAGAACCA CGGCCTTGAT GAGTACTTCA AGTTCAACAT CGAAGCAAAC CACGCGACGC TTGCCGGCCA CACCTTCCAG CACGAACTGA GGATGGCAAG GATCCTCGGA AAACTCGGAA GCATCGACGC CAACCAGGGA GATCTCCTGC TCGGCTGGGA CACCGACCAG TTCCCAACGA ACATCTACGA CACAACACTT GCCATGTACG AAGTGATAAA AGCAGGAGGA TTCACAAAAG GTGGCCTCAA CTTCGACGCG AAGGTGAGGA GGGCTTCCTA CAAGGTAGAA GATCTCTTCA TCGGTCACAT CGCAGGAATG GACACCTTCG CCCTCGGCTT CAAGATAGCA TACAAACTCG CGAAAGACGG AGTATTTGAC AAGTTCATCG AGGAAAAATA CAGAAGCTTC AAAGAAGGTA TCGGAAAAGA GATCGTAGAA GGAAAAACCG ATTTCGAAAA ACTCGAAGAG TATATAATAG ACAAAGAAGA TATCGAACTT CCATCTGGAA AGCAGGAGTA CCTCGAAAGC CTGCTCAACA GCTACATAGT GAAGACAATA GCAGAACTGA GGTGA
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Protein sequence | MMEFFPEIPK IQFEGKESTN PLAFKFYDPN EVIDGKPLKD HLKFSVAFWH TFVNEGRDPF GDPTAERPWN RFSDPMDKAF ARVDALFEFC EKLNIEYFCF HDRDIAPEGK TLRETNKILD KVVERIKERM KDSNVKLLWG TANLFSHPRY MHGAATTCSA DVFAYAAAQV KKALEITKEL GGEGYVFWGG REGYETLLNT DLGLELENLA RFLRMAVEYA KKIGFTGQFL IEPKPKEPTK HQYDFDVATA YAFLKNHGLD EYFKFNIEAN HATLAGHTFQ HELRMARILG KLGSIDANQG DLLLGWDTDQ FPTNIYDTTL AMYEVIKAGG FTKGGLNFDA KVRRASYKVE DLFIGHIAGM DTFALGFKIA YKLAKDGVFD KFIEEKYRSF KEGIGKEIVE GKTDFEKLEE YIIDKEDIEL PSGKQEYLES LLNSYIVKTI AELR
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