| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1150 |
|---|
| Symbol | rpmE |
|---|
| ID | 6092583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 1190350 |
|---|
| End bp | 1190565 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642488344 |
|---|
| Product | 50S ribosomal protein L31 |
|---|
| Protein accession | YP_001739178 |
|---|
| Protein GI | 170288940 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0254] Ribosomal protein L31 |
|---|
| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000442402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGG GAATACATCC AGAGATGAAG CTCGTAACTG TTAAGTGTGC GTGTGGTGCT
GAGCATACTT TTTACACGAC GGTTGACAAT ATAAGAATCG ACGTGTGTTC CAAATGCCAT
CCGTTCTACA CCTCCGGTGG AAAAGGTGGC GTTCTCATAG TGGACACGGA GGGTAGAGTG
GAGAAGTTCA GAAGAAAGTA CGGAGACAAC TATTGA
|
|---|
| Protein sequence | MKKGIHPEMK LVTVKCACGA EHTFYTTVDN IRIDVCSKCH PFYTSGGKGG VLIVDTEGRV
EKFRRKYGDN Y
|
|---|
| |