| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1143 |
|---|
| Symbol | |
|---|
| ID | 6092576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 1185585 |
|---|
| End bp | 1186463 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642488337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001739171 |
|---|
| Protein GI | 170288933 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.37182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAAAAA GCATGACCGG CTTCAGCAGA GTCGAAAAGG TGTCTGGTCC CTATCAGTTC
AGAGTCGAGA TGAAGTCTTT GAATTCGAAA GGCCTGAACA TCATAAACCA GTTGCCCGGA
TACCTTTCCA TGAAAGAGTT AGAGCTGAAC AACCTCGTTC AGGAGTACGT GAGCAGAGGA
AAAGTTCAAA CTCGAGTTCA GGTGAAGTTC CTGGAGCCTC CCAAGGTGCT CGAAATAGAC
AAAAACGTTG TCAGGGCGTA TTATTCGATG CTCGATGAGA TAGTCGGGGA ACTTTCTCTT
CCTGAACCTG TGAAGCTCTC GGACCTTCTG AACTTCAGGG AAGTCTTTCG AATAGAGCTT
TCGGACGAGG AAATAGAAAA TATCTGGAAC CATCTGGTTC CCATTCTCAG AGAGGCCTTG
GAAAAGCTCG TTGAGGAAAG AAAAAAAGAG GGTCAAAAAA TAGGTGCGGA TCTGAAGAGG
ATCCTGGAAG ATCTTTCGTC TCGAGTTGAA GAAATAGAAA AAATCTCTGA TCAGCTTCCC
GCACTTTACC GCGAAAAGAT AAAGGAAGAA GTGGAGAAGA TCCTTCCACA GGATGTCTCC
GTGAAAGAAG ACATTCTGGA GAATCACGTG GCTTTCATGG CCACCAAAGT CGACATAAGA
GAAGAGATCA CTCGGCTTAG AAGTCACATA AAAAGATCTC TTGAGCTGAT AGAAAGCGAC
GAATCGGTCG GAATGAATCT GGATTTTCTC GGTCAGGAGA TGTTGAGGGA GTTGAACACA
ATCCTTTCCA AGTCCATTTC CGGTGAGATA ACCAGCCTTG CTCTCGAGGG GAAGGTACTG
GTTTCTCAAT TCAGGGAGCA GATTCAGAAT GTTGAGTGA
|
|---|
| Protein sequence | MIKSMTGFSR VEKVSGPYQF RVEMKSLNSK GLNIINQLPG YLSMKELELN NLVQEYVSRG
KVQTRVQVKF LEPPKVLEID KNVVRAYYSM LDEIVGELSL PEPVKLSDLL NFREVFRIEL
SDEEIENIWN HLVPILREAL EKLVEERKKE GQKIGADLKR ILEDLSSRVE EIEKISDQLP
ALYREKIKEE VEKILPQDVS VKEDILENHV AFMATKVDIR EEITRLRSHI KRSLELIESD
ESVGMNLDFL GQEMLRELNT ILSKSISGEI TSLALEGKVL VSQFREQIQN VE
|
|---|
| |