Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_1100 |
Symbol | |
ID | 6092533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 1144005 |
End bp | 1144625 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642488295 |
Product | V-type ATPase, D subunit |
Protein accession | YP_001739129 |
Protein GI | 170288891 |
COG category | [C] Energy production and conversion |
COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTGTGG CTCCAACCCG CGGCAACCTG ATCGCTCTGA AAGAACGTCT TTCCTTAGCA CTTCAGGGAT ACGATCTTCT GGAAAGAAAA CGAACGGTCA TCATGAGGGA ACTTGTGAGC CTCATAGAAG AAGCAAGGAA ACTTCAGGAG GAATTGCTCA AGGTCTTCGA AAAAGCTTAC CGTTCCCTTC AGAGAGCTAA TCTGGACCTG GGAATAGAGA GTGTGGAAGA ATACGCCAGC GGGATTTCTG AGTTCAGCGC TCTGAAGATC GTTTTCAGAA GTGTCATGGG AGTTGAGGTA CCTGAGATGG AAATAGAAGG TTTCGATACG GAAATACCTT ACGAGATTTA CAGCACAAAC GCAGCTCTCG ATCAGGCCTA TCTCGCCTTC AGGAAAGCGC TCGAGCTGGT AGCAAAAGTT GCGGTGATTG AGAACAAGGT CTATAGACTG GCTTACGAGG CAAAAAAAGT GAAGAAAAGG GTCAATGCTC TGGAGAACGT GGTGATCCCC CAGCTCAAAG AAACGATAAA ATACATTCAG GATACCCTCG AAGAACAAGA AAGAGAAGAG TTCTTCAAGA TCAAGCGATT GAAAGAAAGG GTGCAGGTTG GAAGAAGATG A
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Protein sequence | MSVAPTRGNL IALKERLSLA LQGYDLLERK RTVIMRELVS LIEEARKLQE ELLKVFEKAY RSLQRANLDL GIESVEEYAS GISEFSALKI VFRSVMGVEV PEMEIEGFDT EIPYEIYSTN AALDQAYLAF RKALELVAKV AVIENKVYRL AYEAKKVKKR VNALENVVIP QLKETIKYIQ DTLEEQEREE FFKIKRLKER VQVGRR
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