Gene TRQ2_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1100 
Symbol 
ID6092533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1144005 
End bp1144625 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID642488295 
ProductV-type ATPase, D subunit 
Protein accessionYP_001739129 
Protein GI170288891 
COG category[C] Energy production and conversion 
COG ID[COG1394] Archaeal/vacuolar-type H+-ATPase subunit D 
TIGRFAM ID[TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGTGG CTCCAACCCG CGGCAACCTG ATCGCTCTGA AAGAACGTCT TTCCTTAGCA 
CTTCAGGGAT ACGATCTTCT GGAAAGAAAA CGAACGGTCA TCATGAGGGA ACTTGTGAGC
CTCATAGAAG AAGCAAGGAA ACTTCAGGAG GAATTGCTCA AGGTCTTCGA AAAAGCTTAC
CGTTCCCTTC AGAGAGCTAA TCTGGACCTG GGAATAGAGA GTGTGGAAGA ATACGCCAGC
GGGATTTCTG AGTTCAGCGC TCTGAAGATC GTTTTCAGAA GTGTCATGGG AGTTGAGGTA
CCTGAGATGG AAATAGAAGG TTTCGATACG GAAATACCTT ACGAGATTTA CAGCACAAAC
GCAGCTCTCG ATCAGGCCTA TCTCGCCTTC AGGAAAGCGC TCGAGCTGGT AGCAAAAGTT
GCGGTGATTG AGAACAAGGT CTATAGACTG GCTTACGAGG CAAAAAAAGT GAAGAAAAGG
GTCAATGCTC TGGAGAACGT GGTGATCCCC CAGCTCAAAG AAACGATAAA ATACATTCAG
GATACCCTCG AAGAACAAGA AAGAGAAGAG TTCTTCAAGA TCAAGCGATT GAAAGAAAGG
GTGCAGGTTG GAAGAAGATG A
 
Protein sequence
MSVAPTRGNL IALKERLSLA LQGYDLLERK RTVIMRELVS LIEEARKLQE ELLKVFEKAY 
RSLQRANLDL GIESVEEYAS GISEFSALKI VFRSVMGVEV PEMEIEGFDT EIPYEIYSTN
AALDQAYLAF RKALELVAKV AVIENKVYRL AYEAKKVKKR VNALENVVIP QLKETIKYIQ
DTLEEQEREE FFKIKRLKER VQVGRR