| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1018 |
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| Symbol | |
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| ID | 6092448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1064228 |
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| End bp | 1065865 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642488214 |
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| Product | CRISPR-associated Csh1 family protein |
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| Protein accession | YP_001739051 |
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| Protein GI | 170288813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02556] CRISPR-associated protein, TM1802 family
[TIGR02591] CRISPR-associated protein, Csh1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGAGA AGATATACAA TCTTGGGAAA ATCGGAATCG AATCTCTCTC AGATTTCGCC
GAAGAACTTC CTCTTGAAGA CGGACTGGCT ATTTTTCTCG AAAGTGGTCC AAATGGTTTG
ATTTTCAAAG ATATTGGTCC CGTTAAGAAA AGCCCTGGTG GAAAGAGTTC GAAGGTTTTC
CTCTACAGAA AACAGCGCGG GAATTTCTCT TCTTCTGTTT CCCCCACCAT GAAATTCCTC
GACGAATCTA GTGTTTCGAG AGACCCTCTG GAAAGGACCT TTGATGTCTT CTTAGGCTTT
TTCGACCATC CGAAGATATC TCACATCAAA GATGTCCTTG AGAGAAATAA AGAAAAGATT
ATTGAAAAGC TAAGAAATTA CGATTTAAAA AACAGATTTC TCACGATATC CATCGATGGA
AAATTTCCCG CAGAAGTTCC AGAAATTCTC CGGGCGTTTG AAGATAAAGT CACACAGAAG
AAAACTAAGG GAGAGGCGAA ATGTTTCCTG TGTGGAAAAG AAGCAAATTC CAGACTGAGT
GATGTGTTCA AATTTGCCAC CTTTGACAAG CCTGGCTTCA CACCTTTTCT CTCCAGGAAA
CACCCGATCC AGATTTGTGG TGAGTGCAGG AGTGTTTTGG AAAAAGCCAG AAGAGTAATT
GATGAAAAGC TTTCTTTCTC CTTCTTCAAC AACAGAATTC TCTGGATAAT TCCCTCCGTG
CCCAATCAGG ATATTCTGGA ATCAGTGATT GAAAAAATAT CTGAAATAAA AGACACCGAC
AAAAAATCAA AGCTTCGCAG TTTTGCTAGA CTCGAAAGAA AAATAGAAGA TGTTCTCTCC
GAAAATGAGA AAGCTGTCTA CGATTTCATA CTGATAGAAA AGGAACAGCA GGCGGAAAGA
ATAGTTCTGC ACATAGAGGA GGTTTCACCT ACAAGAGTGA GACAAATCCT CGATGAGTCA
GATAAAACAG AATCTCAACT CAAGGAAGAT GGCTTCGAAA TTTCTGTGAA CTTCTCGGTG
ATACACAAAT TCTTCGAGGA TCTGGACAGA TACTTCAACT CCCTGTTCAG TGCTGTGTTC
TCTGAGGGGA CGTTTGATAA AAAACTGCTG CTGACTCTCT TTCTTTCGAA AATAAGAAGC
GATTTCTTTG GAAATGATAC TTTACTTTCT GCACGTGAGG CTTTCGCCAC GTACGTTTAT
CTGAGACGTT TGAACGTCTT AAAGGGGGGT GCTTCCGTTT TGAAGGGTGA AGATTTCTTC
TCAAGGTATC CGGAGTTTTT CGATGAACCA TGGAAGAAGG CAGTCTTCTT AGAAGGAGTT
CTGGCAAATT ACCTTCTTTA CCTGCAGTAC GTTAAAAGAA ACTCGAAGGC TTTCACGAAG
AAACTGAAAG GACTCAGACT GACAAAGAGA GATGTGGAGG GGCTTCTCCC AGAAATCAGA
GCCAAGATCG AAGCCTACGG TGGAATGAGT GAAAGTGTGG CAGAGCTTTT CAGGGAGGCT
ACTGAAGCCT TTCTCGAAGC TGGAAACTGG TCAGCATCGC CCGATGAGAT CAGTTTTGTC
TTTGTTTCGG GACTTTCCCT CGGGAAAACT TTCTTCAAGG AGGTAGAGGT TGATGAATCC
GGTGAAAAAC AGGAGTGA
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| Protein sequence | MLEKIYNLGK IGIESLSDFA EELPLEDGLA IFLESGPNGL IFKDIGPVKK SPGGKSSKVF
LYRKQRGNFS SSVSPTMKFL DESSVSRDPL ERTFDVFLGF FDHPKISHIK DVLERNKEKI
IEKLRNYDLK NRFLTISIDG KFPAEVPEIL RAFEDKVTQK KTKGEAKCFL CGKEANSRLS
DVFKFATFDK PGFTPFLSRK HPIQICGECR SVLEKARRVI DEKLSFSFFN NRILWIIPSV
PNQDILESVI EKISEIKDTD KKSKLRSFAR LERKIEDVLS ENEKAVYDFI LIEKEQQAER
IVLHIEEVSP TRVRQILDES DKTESQLKED GFEISVNFSV IHKFFEDLDR YFNSLFSAVF
SEGTFDKKLL LTLFLSKIRS DFFGNDTLLS AREAFATYVY LRRLNVLKGG ASVLKGEDFF
SRYPEFFDEP WKKAVFLEGV LANYLLYLQY VKRNSKAFTK KLKGLRLTKR DVEGLLPEIR
AKIEAYGGMS ESVAELFREA TEAFLEAGNW SASPDEISFV FVSGLSLGKT FFKEVEVDES
GEKQE
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