Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0987 |
Symbol | |
ID | 6092417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 1032696 |
End bp | 1034117 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642488183 |
Product | alpha amylase catalytic region |
Protein accession | YP_001739020 |
Protein GI | 170288782 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTACC CGATGCCGTC TTGGGTTTAC GACAGTGTCG TGTATCAGAT CTTTCCAGAT AGATTTTTCA TCGGAAAGGG AAAAACGGTG GAAGACAAAA AGGATCTGTA CCTGAAGCGG GGAGGAGTCA TAGAGAAATG GGGAGTTCCT CCCCGCAAAC TTCCCGGTGC TCAGCACGTG AAGATCTTCT ACGGAGGAGA TCTGTGGGGA ATAGCCGAGA AGGTCGATTA TTTTGAAGAA CTTGGAATCA ACGTTCTGTA CCTCACTCCT ATCTTTTTGT CCGATACCAA TCACAAGTAC GACACGATCG ATTACTTCAG GGTGGATCCA CAGTTCGGCG GAAAGAGGGC TTTTCTGCAC CTTTTGAGGG TTCTCCATGA GAGGAGTATG AAACTCATTC TCGATGGTGT GTTCAACCAC GTTGGGAGTC AGCATCCGTG GTTCAAAAAA GCGAAGAAAA ACGATCCAGA GTACGTGAAC AGATTTTTCC TTTACAAAGA TAGGCACAGA TCGTGGTTCG ACGTTGGAAG CCTTCCCGAG CTGAACGTGG AAGTCGAAGA AGTGAAGGAA TACATTTTGA AAGTTGTCGA GCACTACCTG AAACTGGAGA TAGACGGTTG GAGGCTGGAT TGCGGCCACG ATCTTGGACC TACCGTCAAC CTGTGGATCA ACATGAAAGT GAAAGAGTTC TCAGCGGAAA AGTACCTCGT GAGTGAGATA TGGACTTACC CGGCAGGATG GGATATGGTT GATGGTCTGA TGAACTACAA CTTCAGAAAC CTCGTGCTGA GCTATGTGAA CGGCGAGACG GATTCCATAG GTTTTCACCT GGAAAGAGCT TACAGGGAGA CGAAGAACAT ATTCGGTTGC TGGAACATGC TTGACAGTCA CGACACCCCG AGACTCGCCA CAATGGTTCC CGACAGAGAC CTGAGAAAAC TCGCTGTAGT TCTTCAGTTC ACTTATCCCG GTGTTCCGCT CGTTTACTAT GGAACAGAGA TAGGTCTCAC AGGTGGAGAA GATCCAGAGT GTCGTGCCAC CATGGAATGG AACAGAGAGA AATGGGATGT TGATCTGTTC GAGTTCTACA AGAAGATGAT CAGACTGAGA AGGACGGATC CAGGTTTGCG CTTTGGAGAG TTTGTCTTGC TGAACGACTC ACCTCTCGCG TTTCTCAGAA AGGCTCCTCA TCCTCTTCAA AACACCATCG TGGTGGTGAA CCCAGGAGAA GAGAAGGTGC TGGTTCTCTC CATTCCCGAC GGGAAAATTA TGAACACCAC TCCCCTTGTC GATGTGTTCA GCGGAGAAAG ATTCCACGTT GACGGCGGGG TTGTGAAGCT TCCCCTTCCA GCGAGATCTT TCAGAATTCT CAAGCCCGAG GATCTGAGAG TGGGTAAGTA CAGATTGTAC AAGAGAGTTT GA
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Protein sequence | MMYPMPSWVY DSVVYQIFPD RFFIGKGKTV EDKKDLYLKR GGVIEKWGVP PRKLPGAQHV KIFYGGDLWG IAEKVDYFEE LGINVLYLTP IFLSDTNHKY DTIDYFRVDP QFGGKRAFLH LLRVLHERSM KLILDGVFNH VGSQHPWFKK AKKNDPEYVN RFFLYKDRHR SWFDVGSLPE LNVEVEEVKE YILKVVEHYL KLEIDGWRLD CGHDLGPTVN LWINMKVKEF SAEKYLVSEI WTYPAGWDMV DGLMNYNFRN LVLSYVNGET DSIGFHLERA YRETKNIFGC WNMLDSHDTP RLATMVPDRD LRKLAVVLQF TYPGVPLVYY GTEIGLTGGE DPECRATMEW NREKWDVDLF EFYKKMIRLR RTDPGLRFGE FVLLNDSPLA FLRKAPHPLQ NTIVVVNPGE EKVLVLSIPD GKIMNTTPLV DVFSGERFHV DGGVVKLPLP ARSFRILKPE DLRVGKYRLY KRV
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