Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0959 |
Symbol | |
ID | 6092389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 993765 |
End bp | 994328 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642488156 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001738993 |
Protein GI | 170288755 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000732376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACCT TCATTGCTAT CGATGTCAAC GAAGAAGTCA AGAAGCAAGC CTCTGAGATC ATAGAAAAAC TCATGAAAAG AGGCTTTGGT GCAACGTGGG TTTCTGAAGA AAACATGCAC CTCACGCTTT TTTTCCTGGG AGAGGTTGAC GAGCAGAAAA TCTCCGAAAT AGCCGAACAC CTCTGTAGAA GAGTGAGAGG TTTTCCTTCT TTTTCGTTCA CCGTGAAAGG TTTTGGGTAC TTCAAGAGGA AGATGTCTCC GCGCGTCTTT TGGCTCGGAG TGGAGAACAC CGATCGCTTG ATGAAACTCT ACGAAGAGCT CAGAAACGAG CTGTCTCACC ACGGTTTCTC GTTTGAAGAG AAGTTCGTTC CTCACATTAC AATTGGAAGG GTGAAGTACT ACCCGGACAA GTGGGAAAAA CTGATCGAAG ACATCGATTT TCCGCCCATC GAAGTTGCGG TGGACAGATT CAAGATTTAC TCGTCCACGT TAACACCGAC AGGTCCCATC TACAAAGTTC TCTACGAATG TCAGTTTGAA GGAGGATTGA TCAGGTATGC CTGA
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Protein sequence | MRTFIAIDVN EEVKKQASEI IEKLMKRGFG ATWVSEENMH LTLFFLGEVD EQKISEIAEH LCRRVRGFPS FSFTVKGFGY FKRKMSPRVF WLGVENTDRL MKLYEELRNE LSHHGFSFEE KFVPHITIGR VKYYPDKWEK LIEDIDFPPI EVAVDRFKIY SSTLTPTGPI YKVLYECQFE GGLIRYA
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