Gene TRQ2_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0954 
Symbol 
ID6092384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp990103 
End bp990780 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID642488151 
Productdeoxyribonuclease V 
Protein accessionYP_001738988 
Protein GI170288750 
COG category[L] Replication, recombination and repair 
COG ID[COG1515] Deoxyinosine 3'endonuclease (endonuclease V) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000171059 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACA GGAAGCTTCA CGGATGGGAT CTTTCTCCGG AGGAAGCGAT AAAGGTGCAG 
AACGAACTCA GAAAGAAGAT AAAGCTTGTA CCATACGAAG GAGAGCCCGA GTACGTGGCA 
GGAGTAGATC TTTCGTTTCC GGGAAAAAAA GAAGGGCTCG CGGTGATAGT GGTACTCGAA 
TATCCTTCTT TCAGAATAGT GGAGATTGTT TCTGAAAGGG GAGAAATAAC TTTTCCCTAC 
ATCCCGGGGC TTCTCGCTTT CAGAGAAGGG CCTCTGTTCT TGAAGGCCTG GGAAAAGCTG 
AGAACGAAAC CCGATGTTGT AGTCTTCGAT GGTCAGGGGC TGGCACATCC CAGAAAACTT 
GGGATAGCCT CCCACATGGG ACTCTTCATA GAGATCCCGA CCATTGGTGT GGCAAAATCC 
AGACTGTATG GAACGTTCAA AATGCCTGAA GATAAAAGAT GTTCCTGGAG TTATCTCTAC 
GACGGCGAGG AGATAATAGG CTGTGTGGTC AGAACAAAAG AAGGAAGTGC TCCTGTTTTC 
GTGTCTCCGG GCCATCTCAT GGACGTTGAA AGTTCGAAAA GACTGGTCAA GGCTTTTACC 
TTACCCGGGA GAAGGATACC GGAACCCACC AGACTGGCAC ACATCTACAC ACAACGGCTC 
AAAAAAGGCC TTTTCTGA
 
Protein sequence
MDYRKLHGWD LSPEEAIKVQ NELRKKIKLV PYEGEPEYVA GVDLSFPGKK EGLAVIVVLE 
YPSFRIVEIV SERGEITFPY IPGLLAFREG PLFLKAWEKL RTKPDVVVFD GQGLAHPRKL 
GIASHMGLFI EIPTIGVAKS RLYGTFKMPE DKRCSWSYLY DGEEIIGCVV RTKEGSAPVF 
VSPGHLMDVE SSKRLVKAFT LPGRRIPEPT RLAHIYTQRL KKGLF