Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0902 |
Symbol | |
ID | 6092332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 933842 |
End bp | 935581 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642488099 |
Product | ABC transporter related |
Protein accession | YP_001738936 |
Protein GI | 170288698 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00896089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTCCGG AGAAGTTTCT GCTAAGGTAC GCTAAAAAAT ACTGGTATCT TTTTCTTGCA GGAACTGTGC TATCTCTGAT TCTCACAGTG CTGGAAGTCC TCCCACCCCG TTTGATGAAA ACGGCGATAG ATAAGTTTCT TGTGGAAAGT ACTTTATCTT CGTTTGAGCG TTTGAACGGC ATTGTAATAA CGGCCTTTAT AATTTTAGGA ATTCGCGTCC TTTCCTTTCT GGTGGGGTTT GCGAGTTCTT ATGTAACAGG GTATGCAGGC TCAAAGATAG TCCTTCTGAT GAGAAAAGAC GTGTTTTCCC ATGTCATTTC ACTTCCGTAT TCTTTTTTCA CAGGAATACC TTCCGGAGTA GTTACCACCA GGATCGTTAA CGACACACAG AATATCCAGG AGTTCTTCTC TTCTGTTGTG ACCAGTGTGA TTATGGATGT TCTCCTTTTG GGAGCGGTCG TTGTTTCTCT CATTCAGCTC AGTCGAGAGC TTTTTGGCCA CGTCTATTAC CTTTTGCCTT TGATCGTCAT TTCGATCCTC CTGTTCAGAT ACTTCGACAG GAGGGCTTAT CGCAAGGTCA GAACCAACCT CGCCCGCCTC AATGCCTTCC TGGCAGAGCA CATAGCAGGT ATCAACGTGA TAAAAATCTT GAATCTGGAA AAACACAAAG AAAAGGAGTT TTCCACAGTG GCCACAGAGT ATTACAGATC TCTGATGGAA CAACTCTACG TTTTCGGAGT CTTTCGTCCT CTCATGGATT TTCTTTACTT TCTGGGAGTG AGTCTTGTTT TGTGGTACGG TGCCAGGTAT ATCGCGAATA AAACCCTTGG ATTCGGTTCT CTGTACGCTT TTGTATCTTA CCTCGATATG TTCTTCAGGC CTCTCAGAGA CCTTTCTGAG AAGTACGATA TAATCCAGAA CTCCATGGCA TCCTCCGAGA AAATTTTGAA CCTCTTAAAA GAAGAACCAG AGGTCATAGG AAATCCAAAT GGACCGAATA AGATTTCAAA AGGTCGTGTT CGTTTTGAGA ACGTGTGGTT TTCGTACGAC GGAAAGAACT GGGTGCTGAA GGACATAAAC TTGGATTTTC AACCAGGGAA ACTGTACGCG ATAGTGGGAG AAACAGGTGG TGGGAAATCC ACTCTCATGA GCCTGATAAA CGGTCTTTAT ATACCGCAGA AGGGAAATAT ATTCATCGAT GAGATTCCGC TTCTGGAGTA CAATTTAAAA CTTGTGAGAA AACAGATAGC AGCTGTCCCG CAGGATGTTC TGTTGTTCAG CGGAACGATC CTCGATAACA TCAGGCTTTT CGATGAGAGC ATACCAGAAG AACGAGTTCT CGAAGCACTG AAAAGAGTCC ATGCTCTGGA TATAATAGAG AGGTTACCCG GAGGTGTTTA CTACGAAATA GTCGAAAGAG GAACCACTCT CTCAGCAGGC GAAAGGCAAC TCATAGCGCT CGCAAGAGCC GTTTTGTTTG ACGCGAAGAT CTTCATTCTT GATGAAGCGA CGAGCAACGT GGATGTTATA ACAGAGACGA AGATTCAGGA GGCTTTAGAA GAGCTTTCAA AAGACAGGAC AGTGATAATG ATCGCACACA GACTCTCTAC TGTGAAAGAC GTCGATGAGA TAGTGGTAGT CCACAATGGT AGGATTGTAG AGAAAGGCAA TCACTATGAA CTGTTAGAGA AGAGAGGATT TTACTACAAC CTTTACAAGA TACAGTTCGA AAATGCGTAG
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Protein sequence | MSPEKFLLRY AKKYWYLFLA GTVLSLILTV LEVLPPRLMK TAIDKFLVES TLSSFERLNG IVITAFIILG IRVLSFLVGF ASSYVTGYAG SKIVLLMRKD VFSHVISLPY SFFTGIPSGV VTTRIVNDTQ NIQEFFSSVV TSVIMDVLLL GAVVVSLIQL SRELFGHVYY LLPLIVISIL LFRYFDRRAY RKVRTNLARL NAFLAEHIAG INVIKILNLE KHKEKEFSTV ATEYYRSLME QLYVFGVFRP LMDFLYFLGV SLVLWYGARY IANKTLGFGS LYAFVSYLDM FFRPLRDLSE KYDIIQNSMA SSEKILNLLK EEPEVIGNPN GPNKISKGRV RFENVWFSYD GKNWVLKDIN LDFQPGKLYA IVGETGGGKS TLMSLINGLY IPQKGNIFID EIPLLEYNLK LVRKQIAAVP QDVLLFSGTI LDNIRLFDES IPEERVLEAL KRVHALDIIE RLPGGVYYEI VERGTTLSAG ERQLIALARA VLFDAKIFIL DEATSNVDVI TETKIQEALE ELSKDRTVIM IAHRLSTVKD VDEIVVVHNG RIVEKGNHYE LLEKRGFYYN LYKIQFENA
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