Gene TRQ2_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0889 
Symbol 
ID6092319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp920869 
End bp921885 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID642488087 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001738924 
Protein GI170288686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAC TCGAAGTGAA GGGACTGAAA AAGTACTTCC CGCTGACAAA GGGTTTTTTC 
AAGAAGGTGG TAGGTTACGT CAGAGCAGTG GATGATATCA GTTTCGATAT AAAACAGGGT
GAAACTCTCG CACTGGTGGG AGAGAGTGGG TGTGGAAAAA CAACGACAGC CAAGAGTATC
CTCAGAGCGA TAGATCCCAC AGATGGAGAT GTTATTCTTC ATCTGGATGG AAAAGACGTG
AACATAGCAA AGCTCTCCAG AGATGAACTG AAACCCTACA GAAGGTATAT GCAGATGATC
TTTCAGAATC CTTATACCTC TCTCAACCCA AGAATGAAGG TCAAAGAGAT CGTTGGTGAA
CCACTTCTGG TGAACGGTAT AGCGAAGGGA AAAGAACTGG AAGATCGAGT GGCAGAACTT
CTGAAAGCAG TCGGATTGAG ACCAGAGTAC ATGATAAGGT ATCCGCATGC CTTCTCAGGT
GGACAGAGGC AGAGAATCGT TATAGCAAGG GCAATCGCCC TGAGACCGAA ACTGGTGGTG
TGTGATGAAC CGACATCTGC ACTGGATGTT TCCATAAGGG CACAGATACT CAACCTTTTA
ATGGATCTTC AGGAAGAATT TGCCCTCACC TATCTCTTTA TCACACACGA CCTGAGCGTT
GTGGAACACA TATCCGATAG AGTTGCGGTG ATGTACTTAG GAAAGATTGT GGAACTTTCC
AGCACCGAGG AGATATTCGA AAATCCAAAG CATCCATACA CGGAGACGCT TTTGAGGTCC
GTTCCAAAGC CTGATCCGGA TCTGAGGGAA GAACTCGTTC CAATAGAAGG AGAGGTTCCA
AACCCGGCAA ACCCACCATC AGGATGTTAC TTCCACCCAA GATGTCCTTA TGCAAAAAGT
ATCTGTAAGG AAGAGTATCC TGAGTTCAGA AATCTTGGAA CGGAAGACAA TCCACATTAC
GTGGCCTGTC ATTTCGCCGA AAGTTTGAAA TTGAGAGGTG TGAAAATCAC TTTGTGA
 
Protein sequence
MKLLEVKGLK KYFPLTKGFF KKVVGYVRAV DDISFDIKQG ETLALVGESG CGKTTTAKSI 
LRAIDPTDGD VILHLDGKDV NIAKLSRDEL KPYRRYMQMI FQNPYTSLNP RMKVKEIVGE
PLLVNGIAKG KELEDRVAEL LKAVGLRPEY MIRYPHAFSG GQRQRIVIAR AIALRPKLVV
CDEPTSALDV SIRAQILNLL MDLQEEFALT YLFITHDLSV VEHISDRVAV MYLGKIVELS
STEEIFENPK HPYTETLLRS VPKPDPDLRE ELVPIEGEVP NPANPPSGCY FHPRCPYAKS
ICKEEYPEFR NLGTEDNPHY VACHFAESLK LRGVKITL