Gene TRQ2_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0887 
Symbol 
ID6092317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp918757 
End bp919863 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content45% 
IMG OID642488085 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001738922 
Protein GI170288684 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGGAAGA GGAAGAAGAT GGACAAAACA GAAGAACTGT ATCTTGCTTC AGAATGGAAG 
TTGATGTGGT GGAGGTTCAA GAAAAACAAA CTCGCAGTTA TTGGAATGGT GATTCTCGGA
ATACTCTACG TTCTTGGTAT TTTCTGCGAA TTTTTCTCAC CGTACGATCC AAACAGGATC
TTTGCAAGGT ACGTATACGC TCCTCCACAG AAGATTCACT TCTTCCACGA AGGAAAATTC
ATAGGTCCCT TTGTTTATGG ATACAAGATG GAAAGAGATC CGGAGACGTT CAGAAGAATC
TATAAGGAAG ATAAGACGAA GATATATAAA ATAAAGCTCT TTGTTCACGG TGACAAATAC
AAACTCTGGA ACACGTGGGA ATCCGACGTT CATTTCTTTG GAGTAGAAGA AGGTACTATC
TTCCTTTTTG GAACTGACAG ACTCGGAAGA GATGTCTTTT CCAGAATTCT TTACGGTGCC
AGGATCTCCA CCACAATAGG GTTGGTGGGA GTCTTTCTCA GCATGGTTCT TGGGATCATC
ATAGGGGGCA TATCCGGATA CTACGGAGGA AAAATCGATA ACTTCATTCA GAGAACTATA
GAGTTTCTGA TTAGTATTCC AACCATTCCT CTCTGGATGG CACTGGCTGC GGCGCTTCCA
AGGTACTGGT CACAGATAAA GGTGTACTTT GCCATCACCG TGATCCTTTC ATTGATAGGC
TGGACAGGGC TTGCGAGAGT CGTGAGAAGT AAATTTCTCT CGCTCAAAGA TGAAGACTTT
GTTGTAGCTG CAAGGCTTGC TGGAGCTTCG GAATGGAGAA TCATTTTCAA ACACATGCTT
CCATCTCTGA CGAGTCACCT TATAGCTTCT GCCACACTTT CGATACCCGG GATGATACTC
GGTGAGACTG GGCTCAGCTT TCTGGGACTG GGACTCAGAC CACCAGCAAT CAGCTGGGGT
GTTCTTCTAC AGGAAGCACA GAACATAAGA ACTGTCGCTC TCTATCCATG GCTTCTGATA
CCTGGTCTCT TTGTGATCAT CACTGTCCTT TGCTTCAACT TCGTCGGTGA TGGTCTGAGA
GACGCCGCCG ACCCATACAA GACATGA
 
Protein sequence
MWKRKKMDKT EELYLASEWK LMWWRFKKNK LAVIGMVILG ILYVLGIFCE FFSPYDPNRI 
FARYVYAPPQ KIHFFHEGKF IGPFVYGYKM ERDPETFRRI YKEDKTKIYK IKLFVHGDKY
KLWNTWESDV HFFGVEEGTI FLFGTDRLGR DVFSRILYGA RISTTIGLVG VFLSMVLGII
IGGISGYYGG KIDNFIQRTI EFLISIPTIP LWMALAAALP RYWSQIKVYF AITVILSLIG
WTGLARVVRS KFLSLKDEDF VVAARLAGAS EWRIIFKHML PSLTSHLIAS ATLSIPGMIL
GETGLSFLGL GLRPPAISWG VLLQEAQNIR TVALYPWLLI PGLFVIITVL CFNFVGDGLR
DAADPYKT