Gene TRQ2_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0873 
Symbol 
ID6092303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand- 
Start bp901037 
End bp902044 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content47% 
IMG OID642488071 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001738908 
Protein GI170288670 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.988364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGCGG TGGAAGTGTT GAGAACAGAA AATCTCAAGT CTTATTACAT TCTGGACATA 
TTCGGAAAAA AGAGAGTAGT GAAGGCAGTG GACGACGTGA ACATTTCGAT CATGGAGAAC 
GAGATATACG GTATCGCAGG AGAGAGCGGA TGTGGAAAGA GCACTCTTTT GAGAGCTCTC 
TTTGCTGCAA TAGAACCACC ACAGAGAATA GTGGGAGGAA AGGTCTTGTA CAGAGAAAAC 
GGAAAAGAAG TGGATGTTTA TTCTCTGAAC GATGAAGAGA GAAGAAGGCT CAGATGGAGT 
TTCATTTCTT ACGTTCCACA GGGATCTATG AGCGTTCTCA ATCCCGTGGT GAAGATAAAG 
GAGACCTTCA AAGACTTCAT AGAGAGCCAC ACGACCGGAA AGACGAAAGA AGAAGCCTAT 
GAGATGGCAA AAGAACACAT AAGAGAGCTT GGCCTTCCGA TAGAAATTCT CAACGCCTAT 
CCACACCAGC TATCCGGTGG AATGAGGCAG AGGGTGACGA TCGCCCTTGC AACTGTTCTG 
TCACCGAAGG TGATCATAGC AGACGAACCA ACGACCGCTC TCGATGTTGT GACTCAGAGA 
GGCGTGGTCC AGCTCCTTAA GGAGATACAA TCTTCAAGAC AGAACACCAT CATCCTTGTC 
ACACACGATA TGGGGGTTCA TGCGAACGTG ACAGACAGGA TAGCGATCAT GTACGCAGGA 
AAGATCATAG AAGAAGGGAA AACAGAAGAG ATCTTTGAAA ACCCCATGCA TCCCTACACG 
AAGTATCTGA TCTACTCGCT TCCAAAGTTT GGAGACAAAG GAAGAAGAGA AAGCGCTCCT 
GGAAGTCCTC CATCACTCGC CGATCTTCCA CCAGGATGCA GTTTCCATCC AAGATGTCCA 
CATGCGTTCG ACAGGTGTAA AAAAGAAGTA CCCCCTCTCA AGGAATACCT GCCGGGCCAC 
AGAGTTGCAT GCTGGTTAGT AGAGGAGGGA AAGAATGCCG CTTCTTGA
 
Protein sequence
MIAVEVLRTE NLKSYYILDI FGKKRVVKAV DDVNISIMEN EIYGIAGESG CGKSTLLRAL 
FAAIEPPQRI VGGKVLYREN GKEVDVYSLN DEERRRLRWS FISYVPQGSM SVLNPVVKIK 
ETFKDFIESH TTGKTKEEAY EMAKEHIREL GLPIEILNAY PHQLSGGMRQ RVTIALATVL 
SPKVIIADEP TTALDVVTQR GVVQLLKEIQ SSRQNTIILV THDMGVHANV TDRIAIMYAG 
KIIEEGKTEE IFENPMHPYT KYLIYSLPKF GDKGRRESAP GSPPSLADLP PGCSFHPRCP 
HAFDRCKKEV PPLKEYLPGH RVACWLVEEG KNAAS