Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0853 |
Symbol | |
ID | 6092283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 879077 |
End bp | 880276 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642488051 |
Product | type II secretion system protein |
Protein accession | YP_001738888 |
Protein GI | 170288650 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000781273 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTT ACAAATACGT GGCCGTGGAG GGGAGCGGTA AGAAGATAAC GGGGGTCATA GAGGCAGAGA ACAAGTTGAA GGCGATATCG ATCCTTTCTG AGAGAGGATT GATGGTTGTT CGTGTGGAGG AGAAAAAAAA TCCAAAGAAA AGTTCGCCGT TCTTTCAGAT TTCAATCAGC GAAATAGCCA CGTTCTGCCG ACAGCTTTCC ATAATGATTT CGGCCGGTAT AAGGATAAAA GAAGCGTTGA ACATTCTGGC TCGTCAGACG GTTTTTTCAA AGCGTTTCAG AAAAGTTATA CTGGAAATCG CTCTCAGCGT TGAAACAGGG GATTCTTTAG CAGAAGCTTT CAGAAAAACA GGTGTTTTCG ACAGTGTTTT GATCAGTATG TTAGAAGCAG GAGAAGAAGG TGGAGTCCTT GACAGAACCC TGAAGAGGGC TGCGGACTTT TACGAAAGTA TGAAAAGGCT TCAGGATGAG GTAAAATCCG CCATGGCTTA TCCTCTCTTT GTTCTCTTCT TTGCAGTGGT AATCGTACTT GTGATCAGTT TTTACATACT CCCCAACCTC GTCAGGGCTT TTGGAACTTC TATTCCACTC TCACCCACGA TTCAATCTCT TCTAAAAGCC AACGAATTTT TGAGTGAAAA CTGGCCGTGG TTCTCGGTGC TTGTGGTGGG TATCATAGCC GGTATTTTCG TTTTGATGAA ATCAAGATAC GGTGTTTACA TAAAGGAATA TCTATCCTTT ATTTTTCCAC CTGTCAGGAA GCTCAGACAG AACATGGGGC TCGAACGATT CGCCAGAACA CTGGGAATTC TTGTGGGAAG CGGTGTCAGA ATAACCGATG CCATAAAGAT GGCCGCTCAG GCTTCCAGTT CACCTTCCAT TATCAGAAAA ACCGAAGAAA TGGTTCGGAA GATATCCGAA GGGAAAACCC TTCGAGATAC TTTTGCAGAA AGTGGAGTTT TTCCACAGTT GATTTATGAG ATGATCGGAA CAGGAGAAGA GACTGGAAAA GTCGACGAAG TGATGGAAAG AGTGGCCGAC TTCTACGAGG ACATAGTGAA AAACAGTGTG AAGCAGCTTG TTTCTCTGGT AGAGCCTCTA TTGATAGCAG GTGTTGGTGG ATTTGTGGCT TTCCTCGCGT ATTCGATATA CACCACGGTA TTTCAGCTTC AGAGGAGTAT AGGTGGATGA
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Protein sequence | MPFYKYVAVE GSGKKITGVI EAENKLKAIS ILSERGLMVV RVEEKKNPKK SSPFFQISIS EIATFCRQLS IMISAGIRIK EALNILARQT VFSKRFRKVI LEIALSVETG DSLAEAFRKT GVFDSVLISM LEAGEEGGVL DRTLKRAADF YESMKRLQDE VKSAMAYPLF VLFFAVVIVL VISFYILPNL VRAFGTSIPL SPTIQSLLKA NEFLSENWPW FSVLVVGIIA GIFVLMKSRY GVYIKEYLSF IFPPVRKLRQ NMGLERFART LGILVGSGVR ITDAIKMAAQ ASSSPSIIRK TEEMVRKISE GKTLRDTFAE SGVFPQLIYE MIGTGEETGK VDEVMERVAD FYEDIVKNSV KQLVSLVEPL LIAGVGGFVA FLAYSIYTTV FQLQRSIGG
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