Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0846 |
Symbol | |
ID | 6092276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 871074 |
End bp | 872942 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642488044 |
Product | hypothetical protein |
Protein accession | YP_001738881 |
Protein GI | 170288643 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT GGATTTTTCT GTTCTTGTTA TTTCTGGTTG TACCCGTTCT TTCCCTTGCC ATCGATTTAG AAAATGTCAC CGCACAGTTT CAAAAGCTGG TGGAAGATTA CGAAAGTGGA TCCCCGCAGG ATCCATTCGT GAGTTATGTA AAAGAAAACA TCCCTCAACT TCAAAAGTAC AGAATCTTTC GAAGATTTCT TGCAGGAAGT GTGGAAAAAA CTGAATTTGC AAAAACACCG GGTGACTACC TTTTCGTGCT CTATCAAAGC TGGAAAGAAA CCAACTGGGA AAGAAAACTC TCCAACGTTC TTTTCCTCTC TTACTTTCAG TCCACGATGT CCGGCTCAAA GCCTTCAGAG AGTGTCCTGA AAAATTCTCC TGCCTTCAAT TCCTTCTTTG CCGAATACAG AATGTTCGTT CGCTCCAACG CGTTGAACTT GATTAGATGG ATCTTAGCCT ACTACACAGG AGGAACAAAC ACTCCCCCAC CTGTTGAATT CAACCTTGGC ATCAGAAAAT TAGGGTTCTC TTTCAATGTG AATCATGATG TTCATCCAGA TATTTTGAAA CTCCTCCCTG AAGATCTGGA AACAAAATTA AAAGAAGCGA TCGAGGAAAT CGCCTCTTCG AAAAACCAAG CCGAGTACAC TCGAAACATA AACAGGCAGG CGAGTCTTCT GTGGAAAGAA TTCGAAAGTA ATATCTCCGC ACTCCAGAAC GAAGTAGCGG GTATCTTTGA AAACACATCA CTATCGATAT CCAACTTCTG GTGGATCCGG TTTGTCGTCT ACGGTGTTCT TCTGGTGATT TTCCTGAGAA AGTATCGAAC GATACTGCAG TTCATCATCG CCGCAGAGAT TCTGTTCATC TGGGTGACAA AATCGCTGTA TCTCAACACC GTTGAAAACA TGATCTTTTC AACTTTTGTC GTTTTCACGT TCATCTTTTT CAATTTTATC TTTCTTGTCA GGAAAAGGTA TCTCTATCCA CTGCTATCAC TGATATTTGT CTTCCTCCTT TTCATCCCGT CGTACATCTC AGTCAGAGAA ATGGGTATGG ATAGTGCTTT TGAGAACTCA CCGTATTACA ATCAGCTGAA AGTTGAGATA TTTGAAGATC CTGACTCACA CGTAAAAACG ATCATAAACA GAATAAACAC GATAGCCCTT TCAAGTAAAG AACACACAAA GCAAATAGTG GAAACCCTTG GATCTTTACC GGAAGAACTG CTAAAAATCG AAGCTCTAAA ATCGATAGAA TCCACTAAAA ACGGCATTTT CCTTCAGCTG AATGATCGCT CAAAATTCTT CACCACAGCC GGGTTCGAAG ACAGATTGAA TTTAACCGGT AAAATCGAAG GCGATCTGAG TGATTACCTC TCACAGGAAA AATCCAGGTA TAGAAAGTAC AAAAGAGAAA TCAAATCACT GGACCAATTT GTAGAAAGGA TCACCTCGTA CACTTCCGAA AAATTCTCAC AGGATTTCGA AAGAGAACTG ACAAACACCA TTGAAAGGTA CCCACTCATT GAAGGTGTTT CTTTCTCCTA TTCAACGGAG AAAAGGTATC TCTCGCTGAA ACCTTATCGC ACCGTGAATG GATTGATCGG CATCTTCACT TTCTTTTTGC TTTTCTTCTC CGCTGTTCTT GGAGGAAGAT ATCTGATCTT TCCCGCAGCA GCGACTCTGT TCACCTCCAT CCTTTCGATG ATCAAATGGA AACACCTCGA AGTTTTCGTT GAAAGCGGAA TTTTCCCTCT GATCATCGAA ACTTCGTCCA CTCACACCTT CCACATCGAA GTGTTTTTGA TATTCGTTTC TCTGTTTCTT CTCTATAAAA ACTTCATGAA AAGGAGGGTG AAAGCATGA
|
Protein sequence | MKKWIFLFLL FLVVPVLSLA IDLENVTAQF QKLVEDYESG SPQDPFVSYV KENIPQLQKY RIFRRFLAGS VEKTEFAKTP GDYLFVLYQS WKETNWERKL SNVLFLSYFQ STMSGSKPSE SVLKNSPAFN SFFAEYRMFV RSNALNLIRW ILAYYTGGTN TPPPVEFNLG IRKLGFSFNV NHDVHPDILK LLPEDLETKL KEAIEEIASS KNQAEYTRNI NRQASLLWKE FESNISALQN EVAGIFENTS LSISNFWWIR FVVYGVLLVI FLRKYRTILQ FIIAAEILFI WVTKSLYLNT VENMIFSTFV VFTFIFFNFI FLVRKRYLYP LLSLIFVFLL FIPSYISVRE MGMDSAFENS PYYNQLKVEI FEDPDSHVKT IINRINTIAL SSKEHTKQIV ETLGSLPEEL LKIEALKSIE STKNGIFLQL NDRSKFFTTA GFEDRLNLTG KIEGDLSDYL SQEKSRYRKY KREIKSLDQF VERITSYTSE KFSQDFEREL TNTIERYPLI EGVSFSYSTE KRYLSLKPYR TVNGLIGIFT FFLLFFSAVL GGRYLIFPAA ATLFTSILSM IKWKHLEVFV ESGIFPLIIE TSSTHTFHIE VFLIFVSLFL LYKNFMKRRV KA
|
| |