| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0844 |
|---|
| Symbol | |
|---|
| ID | 6092274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 868439 |
|---|
| End bp | 869962 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642488042 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001738879 |
|---|
| Protein GI | 170288641 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTACG CAGTTGTGAT GAAGGGAATC GTTAAAAGGT TTCCAGGAGT TCTGGCAAAT
GATCACGTGG ATCTCTTCGT CGAAAAGGGT GAAATCCACG CTATCGTTGG TGAAAACGGC
GCTGGAAAAA CCACTCTCAT GAAACAACTC TACGGCCTCT TAAAGCCCGA TGAGGGGGAA
ATCTACATAA ACGGAAAAAG AGTAGAATTT TCCGGTCCCG CTGACGCGAT AAAAAATGGT
ATAGGTATGG TTCACCAGCA TTTCATGCTC GTTGACAACC TGACGGCTTA CGAGAACGTG
ATCATCGGGA TGGAACCAAG GAAAGGAATT CTTCTGGATA GGAAAAAGGC GAGAAAAGAA
GTTAAAAAAC TCTCGGAAGA GTACGGATTA ACAATAGACG TCGATATGAA AATAGAGGAC
ATGCCCGTGG GGTTGCAGCA GAGAGTAGAG ATCATCAAGA CACTCTACAG AGGAGCAGAG
ATTCTCATAT TAGATGAACC TACTGCCGTC CTCACTCCAC AGGAAACAGA GGAACTCTTC
GAAGTCTTGA GACGATTGAA AAAGAGCGGG AAGACGATCA TATTCATTTC GCATAAATTG
AACGAAGTGA TGGAGATCTC CGATAGAATC ACCGTTATGA GACAGGGAAG GGTCACAGGA
AACCTCATTA CTTCACAAAC CACACCACAG GAAATAGCGA GATTGATGGT GGGAAGGGAA
GTCGTTCTCA CGGTTGAGAA AAAGCCAAAA GAAGCCGGTG AAACACTCCT CAAAATAGAA
GATCTCTGGG TCAAGGACAA CAGGAAACTG GACGTTGTAA AGGGAGTTTC TTTCGAGGTA
AAGAGGGGAG AGATAGTAGG GATAGCCGGT GTTGCTGGAA ACGGTCAGTC CGAACTGGTA
GAAGCGATCA CAGGACTTCG CAGAGCGGAA CGCGGAAGAG TCCTCTTCAG AGGTGAAGAT
ATAACGGGAT ACGACCCAAA AAGATTGCGA GATCTCGGAA TGTTCCACGT TCCAGAAGAT
CGACTCAAAA GAGGTTTGAT AGTGGATTTT CCGGCATATT TCAACACCAT TTTGGGAAGG
CACATGATAG AGCCTTTCGT GAAGAGCGGT TTTCTCAACA TGAAGGAAAT AAAAAGATTT
TCAAAACAAC TTTTTGAAAA GTTCGATATC AGGCCGAGAA ATATAGAACT CCTCGCGGGA
AGTTTCTCCG GTGGGAATCA GCAGAAGATC ATCGTTGCGC GTGAAATGAG TTTCTCCCCC
GAACTTCTCG TTGTGGCTCA ACCGACACGT GGTCTGGACG TGGGTGCGAT AGAATTCATC
CACAAAACAC TCGTATCGAT GAGAGACGCA GGTGTTGGTA TTCTTCTCAT ATCCATGGAA
CTGGACGAAA TCTTCTCGCT CAGCGACAGA ATACTGGTTA TGTACGAAGG ACAGATAATG
GGAGAAGTCA GACCGGAAAA AACCACTCCA GAGGAAGTAG GGCTCATGAT GGCAGGTAAA
AGACTGGAGG AGATCAGAAG ATGA
|
|---|
| Protein sequence | MEYAVVMKGI VKRFPGVLAN DHVDLFVEKG EIHAIVGENG AGKTTLMKQL YGLLKPDEGE
IYINGKRVEF SGPADAIKNG IGMVHQHFML VDNLTAYENV IIGMEPRKGI LLDRKKARKE
VKKLSEEYGL TIDVDMKIED MPVGLQQRVE IIKTLYRGAE ILILDEPTAV LTPQETEELF
EVLRRLKKSG KTIIFISHKL NEVMEISDRI TVMRQGRVTG NLITSQTTPQ EIARLMVGRE
VVLTVEKKPK EAGETLLKIE DLWVKDNRKL DVVKGVSFEV KRGEIVGIAG VAGNGQSELV
EAITGLRRAE RGRVLFRGED ITGYDPKRLR DLGMFHVPED RLKRGLIVDF PAYFNTILGR
HMIEPFVKSG FLNMKEIKRF SKQLFEKFDI RPRNIELLAG SFSGGNQQKI IVAREMSFSP
ELLVVAQPTR GLDVGAIEFI HKTLVSMRDA GVGILLISME LDEIFSLSDR ILVMYEGQIM
GEVRPEKTTP EEVGLMMAGK RLEEIRR
|
|---|
| |