Gene TRQ2_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0832 
Symbol 
ID6092262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp855733 
End bp857295 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content44% 
IMG OID642488030 
ProductABC transporter related 
Protein accessionYP_001738867 
Protein GI170288629 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTCCCC TCCTCGTTTT CAGGGGTGAT CGAATGGAGA TACTGAAAGC AAAGGGCATA 
GTGAAAAGAT TCCCTGGAGT TGTGGCTGTG GACAACGTCG ATTTTGAGGT TTACGAAAAC
GAGATTGTCT CTCTGATAGG TGAAAATGGT GCTGGTAAAT CCACCCTCAT AAAAATTCTG
ACGGGTGTCC TCAAACCTGA TGCGGGAGAA ATTCTGGTCA ACGGCGAAAG GGTAGAATTT
CACTCTCCGG TCGACGCGTT CAAAAAGGGT ATAAGTGTTA TCCATCAGGA ACTGAACCTG
TGTGACAACA TGACTGTGGC GGAAAACATC TTTCTCGCCT ATGAAGCTGT CAGAGGACAG
AAAAGAACCC TTTCCAGTAG AGTTGATGAG AACTATATGT ACACAAGATC TAAAGAACTG
CTCGATCTCA TCGGCGCCAA ATTCTCTCCA GACGCTCTGG TGAGAAATCT CACCACCGCC
CAGAGACAGA TGGTGGAGAT ATGTAAGGCA CTGGTTAAAG AACCCAGGAT CATCTTCATG
GATGAACCCA CATCATTTCT CACTGTCGAA GAGACAGAAA GACTCTTCGA AATCATAGAA
ATGTTGAAAA GTAGAGGTAT TTCTGTCGTT TTCGTTTCAC ATAGACTGGA CGAAGTTATG
AGGATAAGTG ACAGGATCGT TGTGATGAGA GACGGAAAAA GAGTCGGCGA GTTGAAAAAA
GGAGAATTCG ATGTGGACAC GATCATAAAA ATGATGGTAG GACGTGAAGT GGAGTTTTTC
CCACACGGAA TTGAGACCAG ACCCGGAGAA ATTGCACTCG AAGTCAAAAA CCTGAGATGG
AAGGATAAAG TGAAGAATGT TTCTTTTGAA GTGAGAAAGG GAGAAGTTCT GGGATTCGCG
GGACTTGTGG GGGCTGGAAG AACTGAAACG ATGCTCTTGG TGTTCGGAGT GAATCAAAAG
GAATCTGGAG ACATATACGT TAACGGAAGG AAAGTTGAAA TAAAAAATCC GGAAGATGCC
ATAAAGATGG GGATAGGACT CATTCCTGAA GACAGAAAAC TTCAGGGACT CGTTTTGAGA
ATGACTGTGA AGGACAACAT CGTGCTCCCA TCACTGAAAA AAATCAGCAA ATGGAGGCTC
GTGCTCGATG AAAGAAAAGA AGAAGAGATC TCAGAAGACT ATGTAAAAAG ACTCTCCATA
AAAACGCCTT CCATTTATCA AATAACAGAA AATCTATCGG GCGGAAACCA GCAGAAAGTG
GTCCTTGCCA AATGGCTCGC CACGAATGTG GATATTCTGA TCTTCGACGA ACCAACACGC
GGAATAGACG TTGGTGCAAA GGCAGAAATA CACAGAATGA TCAGAGAACT CGCCGCACAG
GGAAAAGCTG TGATCATGAT CTCTTCGGAA CTCCCAGAAA TACTGAATCT CAGCGATAGA
ATAATCGTCA TGTGGGAAGG TGAAATCACA GCCGTTCTGG ACAACAGAGA GAAAAAAGTC
ACCCAGGAGG AAATAATGTA CTACGCATCT GGACAGAAAA AACAGAACGG GAGGGTCGCA
TAA
 
Protein sequence
MFPLLVFRGD RMEILKAKGI VKRFPGVVAV DNVDFEVYEN EIVSLIGENG AGKSTLIKIL 
TGVLKPDAGE ILVNGERVEF HSPVDAFKKG ISVIHQELNL CDNMTVAENI FLAYEAVRGQ
KRTLSSRVDE NYMYTRSKEL LDLIGAKFSP DALVRNLTTA QRQMVEICKA LVKEPRIIFM
DEPTSFLTVE ETERLFEIIE MLKSRGISVV FVSHRLDEVM RISDRIVVMR DGKRVGELKK
GEFDVDTIIK MMVGREVEFF PHGIETRPGE IALEVKNLRW KDKVKNVSFE VRKGEVLGFA
GLVGAGRTET MLLVFGVNQK ESGDIYVNGR KVEIKNPEDA IKMGIGLIPE DRKLQGLVLR
MTVKDNIVLP SLKKISKWRL VLDERKEEEI SEDYVKRLSI KTPSIYQITE NLSGGNQQKV
VLAKWLATNV DILIFDEPTR GIDVGAKAEI HRMIRELAAQ GKAVIMISSE LPEILNLSDR
IIVMWEGEIT AVLDNREKKV TQEEIMYYAS GQKKQNGRVA