| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0723 |
|---|
| Symbol | |
|---|
| ID | 6092140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 738460 |
|---|
| End bp | 739398 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642487909 |
|---|
| Product | D-cysteine desulfhydrase |
|---|
| Protein accession | YP_001738759 |
|---|
| Protein GI | 170288521 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | [TIGR01275] pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000361727 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATCG ATCTTTCCCT TAAACCCACA CCTGTTCAGT TTCTCAAAAG ACTCTCGGAA
GAATACGGGT TCAACATCTA CGTTAAAAGA GACGATCTCA CAGAGCTTGT GGGATCGGGC
AACAAAATCA GAAAGCTGGA GTATCTTCTC TGGGAAGCTC TTAAAAAAGG AGCAACAACT
GTCTTCACCT GTGGAGGTCT TCAGTCGAAC CATGCCAGAG CAACGGCATA CGTTTCGAGA
AAACACGGTT TGAAACCTGT TCTCTTCCTC AGAAAAGGAG AGAAGGTTCT GAACGGAAAT
CTTCTCCTCG ACATTCTCCT CGGTGCTGAA ATAGTGGAAG TTTCCCAGGA AGAGTACGAA
CGCATCGATG AGATCTTCGA TGTTCACAAA AAGATGAGAG AGAAGAAAGG TGAAAAGGTG
TACGTGATAC CCGAAGGGGG ATCGAACTCC CTTGGGGCCT TTGGCTACTT CAATGCGGTG
CTGGAGATGA AAGATCAATT GAACCTCGAA TCTTTCGATG CTATCGTGTG TGCTGTTGGA
AGTGGTGGAA CCATAGCGGG TTTGTCAGCT GGAATTTCCT TTCTGGAATA TCACGTACCT
GTGGTGGGTG TGAACGTCAC CACGAAAAAC TCGGATTATT TTGTGGGGAA GGTGAAAAGA
ATAATTAGTG GTATGGAAGA GCATGGTCTG AAGATCAACG AAACTGTTTT CAAAGTGGTG
GACGATTACA GAGGGCCGGG ATATGCGATT CCGTCCAGTG AGGATGTGGA GATCTTGAAA
GAAGTAGCTT CGATAGAAAG TATCATCCTC GATCCGGTCT ACACGGCAAA AGCCTTCAGA
GGAATGATCG AAATGTTCAG AAATTCAGGA AAGAACGTTC TTTTCATCCA CACGGGGGGA
ATATTCGGTC TGTTCGCGCA GAGCGGGAGG TTGGTATAA
|
|---|
| Protein sequence | MRIDLSLKPT PVQFLKRLSE EYGFNIYVKR DDLTELVGSG NKIRKLEYLL WEALKKGATT
VFTCGGLQSN HARATAYVSR KHGLKPVLFL RKGEKVLNGN LLLDILLGAE IVEVSQEEYE
RIDEIFDVHK KMREKKGEKV YVIPEGGSNS LGAFGYFNAV LEMKDQLNLE SFDAIVCAVG
SGGTIAGLSA GISFLEYHVP VVGVNVTTKN SDYFVGKVKR IISGMEEHGL KINETVFKVV
DDYRGPGYAI PSSEDVEILK EVASIESIIL DPVYTAKAFR GMIEMFRNSG KNVLFIHTGG
IFGLFAQSGR LV
|
|---|
| |