Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0712 |
Symbol | |
ID | 6092129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | + |
Start bp | 727309 |
End bp | 728589 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642487898 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001738748 |
Protein GI | 170288510 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATC TCCTCACAAG GCGCTTTGTT CTGAACTCGA AAGAAGTGAG AGAAGGTGAT GTGTTCGTCG CTGTGAAGGG GAAAAAATTC GATGGTCACG ATTTTATAGA TGAAGCCCTC AGGAACGGTG CTTACGCGAT CATTGCCGAG AGAAAAACGG TGGATTCTGA TAGAATCTTT CTCGTAGAAA GCTCCGTTGA CACGCTTGCT AAGCTGGCCC GAGAAAAGCT CGGGAATTTT TCCGGTACAG TCGTTGGTGT AACAGGTTCA TCGGGAAAAA CCACCACGAA AGAGATATTG TACAACCTTC TCAAAAACAA GAGAAGTGTT TTCAAAACAC CGGGAAACAT GAACACGGAG TACGGGTTGC CACTCTCCAT CCTCAACGAT TACAAAGGAG AGGAAATCCT GGTTCTCGAA ATGGCCGCGA GCAGGCCCGG TGATATCGCT CACCTGTGTA AAATCGCTCC TCCGGATGTC GCCGTTCTCC TCAACGTTGG AAGCGCTCAC CTCGAGTTTT TTGGAACACG AGAAAGAATC ATGGAAACCA AGATGGAGAT CATCAAGCAC TCGAAAGAAA ATGCGACAGC CGTAACACTC TTTGACGATC CCGATTTGAG AAGGGAAGTA CCTTGTTACA GAAAAACGTT GTTCTTCGGC AAAGAAGGCG GTGACTCGGT TCTAAAGGAT TGGTGGTACT ATGAGGGTTC CACGATCGCA GAGTTCGAAG CTTTTGATTC TCTTTTTACA GTGAAACTCT CCGGATACTG GAACGGAGGG CAACTCTTGA ACATCGCCGC TTCTCTGTGT GTCATGAGAG CTTTGGGCGA AACTGTGGAT ATCTTCGATC TTGCCAGCCT GAAAACAGTT CCCGGCCGTT TCAATGTGAG AGAAAAAAAA GGTGTGCTGA TCGTGGACGA TACGTACAAC GCAAGCCCTG AAGCGTTTCA AACTTCTATA GAGGCGCTTC TTCGCTTTCC TGGAAGGAGA TTCGCCGTTG TTGGAGCAAT GAAAGAGCTT GGGGAGAGGT CGAAGGAATT TCACGAAGAG CTCGGAGAGA GATTGAACGT TCTGGATGGG GTGTACATTT TCTTGTCAGA ACCCGAAGCG GAATGGATCA AGTCCAAGAA GATCATTCTG AAGTCAGACG ATCCCGAAAA GATAGCGAAA GATCTTGCTT CCAGGGTAAC AGAAGGGGAT GTGGTTCTCT TCAAAGCTTC AAGAGCGGTG AGAATAGAAA AAGTTCTGGA AATGTTTGAA AAGGAGCTGG AGAGAAAATG A
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Protein sequence | MKDLLTRRFV LNSKEVREGD VFVAVKGKKF DGHDFIDEAL RNGAYAIIAE RKTVDSDRIF LVESSVDTLA KLAREKLGNF SGTVVGVTGS SGKTTTKEIL YNLLKNKRSV FKTPGNMNTE YGLPLSILND YKGEEILVLE MAASRPGDIA HLCKIAPPDV AVLLNVGSAH LEFFGTRERI METKMEIIKH SKENATAVTL FDDPDLRREV PCYRKTLFFG KEGGDSVLKD WWYYEGSTIA EFEAFDSLFT VKLSGYWNGG QLLNIAASLC VMRALGETVD IFDLASLKTV PGRFNVREKK GVLIVDDTYN ASPEAFQTSI EALLRFPGRR FAVVGAMKEL GERSKEFHEE LGERLNVLDG VYIFLSEPEA EWIKSKKIIL KSDDPEKIAK DLASRVTEGD VVLFKASRAV RIEKVLEMFE KELERK
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