Gene TRQ2_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0686 
Symbol 
ID6092103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp706552 
End bp707652 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content46% 
IMG OID642487872 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_001738722 
Protein GI170288484 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0347365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA CCGTCACGAC TCTTGAATTG AAAGACAAAA TAACCATCGC CTCAAAAGCG 
CTCGCAAAGA AATCCGTGAA ACCCATTCTT GCTGGATTTC TTTTCGAAGT GAAAGATGGA
AATTTCTACA TCTGCGCGAC CGATCTCGAG ACCGGAGTCA AAGCAACCGT GAATGCCGCT
GAAATCTCCG GTGAGGCACG TTTTGTGGTA CCAGGAGATG TCATTCAGAA GATGGTCAAG
GTTCTCCCAG ATGAGATAAC GGAACTTTCT TTAGAGGGGG ATGCTCTTGT TATAAGTTCT
GGAAGCACCG TTTTCAGGAT CACCACCATG CCCGCGGACG AATTTCCAGA GATAACGCCT
GCCGAGTCTG GAATAACCTT CGAAGTTGAC ACTTCGCTCC TCGAGGAAAT GGTTGAAAAG
GTCATCTTCG CCGCTGCCAA AGACGAGTTC ATGCGAAATC TGAATGGAGT TTTCTGGGAA
CTCCACAAGA ATCTTCTCAG GCTGGTTGCA AGTGATGGTT TCAGACTTGC ACTTGCTGAA
GAGCAGATAG AAAACGAGGA AGAGGCGAGT TTCTTGCTCT CTTTGAAGAG CATGAAAGAA
GTTCAAAACG TGCTGGACAA CACAACGGAG CCGACTATAA CGGTGAGGTA CGATGGAAGA
AGGGTTTCTC TGTCGACAAA TGATGTAGAA ACGGTGATGA GAGTGGTCGA CGCTGAATTT
CCCGATTACA AAAGGGTGAT CCCCGAAACT TTCAAAACGA AAGTGGTGGT TTCCAGAAAA
GAACTCAGGG AATCTTTGAA GAGGGTGATG GTGATTGCCA GCAAGGGAAG CGAGTCCGTG
AAGTTCGAAA TAGAAGAAAA CGTTATGAGA CTTGTGAGCA AGAGCCCGGA TTATGGTGAA
GTGGTTGATG AGATTGAGGT TCAAAAAGAA GGGGAAGATC TCGTGATCGC TTTCAACCCG
AAGTTCATCG AGGACGTTTT GAAGCACATT GAGACTGAAG AAATCGAAAT GAACTTCGTT
GATTCTACCA GTCCATGTCA GATAAATCCA CTCGATATTT CTGGATACCT TTACATAGTG
ATGCCCATCA GACTGGCATG A
 
Protein sequence
MKVTVTTLEL KDKITIASKA LAKKSVKPIL AGFLFEVKDG NFYICATDLE TGVKATVNAA 
EISGEARFVV PGDVIQKMVK VLPDEITELS LEGDALVISS GSTVFRITTM PADEFPEITP
AESGITFEVD TSLLEEMVEK VIFAAAKDEF MRNLNGVFWE LHKNLLRLVA SDGFRLALAE
EQIENEEEAS FLLSLKSMKE VQNVLDNTTE PTITVRYDGR RVSLSTNDVE TVMRVVDAEF
PDYKRVIPET FKTKVVVSRK ELRESLKRVM VIASKGSESV KFEIEENVMR LVSKSPDYGE
VVDEIEVQKE GEDLVIAFNP KFIEDVLKHI ETEEIEMNFV DSTSPCQINP LDISGYLYIV
MPIRLA