Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0686 |
Symbol | |
ID | 6092103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 706552 |
End bp | 707652 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642487872 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_001738722 |
Protein GI | 170288484 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0347365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA CCGTCACGAC TCTTGAATTG AAAGACAAAA TAACCATCGC CTCAAAAGCG CTCGCAAAGA AATCCGTGAA ACCCATTCTT GCTGGATTTC TTTTCGAAGT GAAAGATGGA AATTTCTACA TCTGCGCGAC CGATCTCGAG ACCGGAGTCA AAGCAACCGT GAATGCCGCT GAAATCTCCG GTGAGGCACG TTTTGTGGTA CCAGGAGATG TCATTCAGAA GATGGTCAAG GTTCTCCCAG ATGAGATAAC GGAACTTTCT TTAGAGGGGG ATGCTCTTGT TATAAGTTCT GGAAGCACCG TTTTCAGGAT CACCACCATG CCCGCGGACG AATTTCCAGA GATAACGCCT GCCGAGTCTG GAATAACCTT CGAAGTTGAC ACTTCGCTCC TCGAGGAAAT GGTTGAAAAG GTCATCTTCG CCGCTGCCAA AGACGAGTTC ATGCGAAATC TGAATGGAGT TTTCTGGGAA CTCCACAAGA ATCTTCTCAG GCTGGTTGCA AGTGATGGTT TCAGACTTGC ACTTGCTGAA GAGCAGATAG AAAACGAGGA AGAGGCGAGT TTCTTGCTCT CTTTGAAGAG CATGAAAGAA GTTCAAAACG TGCTGGACAA CACAACGGAG CCGACTATAA CGGTGAGGTA CGATGGAAGA AGGGTTTCTC TGTCGACAAA TGATGTAGAA ACGGTGATGA GAGTGGTCGA CGCTGAATTT CCCGATTACA AAAGGGTGAT CCCCGAAACT TTCAAAACGA AAGTGGTGGT TTCCAGAAAA GAACTCAGGG AATCTTTGAA GAGGGTGATG GTGATTGCCA GCAAGGGAAG CGAGTCCGTG AAGTTCGAAA TAGAAGAAAA CGTTATGAGA CTTGTGAGCA AGAGCCCGGA TTATGGTGAA GTGGTTGATG AGATTGAGGT TCAAAAAGAA GGGGAAGATC TCGTGATCGC TTTCAACCCG AAGTTCATCG AGGACGTTTT GAAGCACATT GAGACTGAAG AAATCGAAAT GAACTTCGTT GATTCTACCA GTCCATGTCA GATAAATCCA CTCGATATTT CTGGATACCT TTACATAGTG ATGCCCATCA GACTGGCATG A
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Protein sequence | MKVTVTTLEL KDKITIASKA LAKKSVKPIL AGFLFEVKDG NFYICATDLE TGVKATVNAA EISGEARFVV PGDVIQKMVK VLPDEITELS LEGDALVISS GSTVFRITTM PADEFPEITP AESGITFEVD TSLLEEMVEK VIFAAAKDEF MRNLNGVFWE LHKNLLRLVA SDGFRLALAE EQIENEEEAS FLLSLKSMKE VQNVLDNTTE PTITVRYDGR RVSLSTNDVE TVMRVVDAEF PDYKRVIPET FKTKVVVSRK ELRESLKRVM VIASKGSESV KFEIEENVMR LVSKSPDYGE VVDEIEVQKE GEDLVIAFNP KFIEDVLKHI ETEEIEMNFV DSTSPCQINP LDISGYLYIV MPIRLA
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